DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir56d and Ir52b

DIOPT Version :9

Sequence 1:NP_611432.1 Gene:Ir56d / 37252 FlyBaseID:FBgn0034458 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster


Alignment Length:664 Identity:151/664 - (22%)
Similarity:269/664 - (40%) Gaps:147/664 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDNRAAELILRERNIFPTNGSDNITLLNNMFVLEMFYRITQLYHFKNFIFY-ISERLDLN---NK 61
            |||....|:|:.||                   |.||. |.|.:.|:..|: :.:.:|:.   ..
  Fly    29 MDNELINLLLKLRN-------------------EEFYD-TLLVYGKDCEFHSVIKNVDVAVVLVS 73

  Fly    62 DSQEFFHNFWTYFPMAPNLIITREHHLGIPMMQFISTPSLVMVFTTGKDDPIMELASHNQQGIHW 126
            ||..|..||                            .||.::.:.|.|   ::....|...|..
  Fly    74 DSMNFEWNF----------------------------SSLTLILSCGPD---IDNGGPNSTSIKL 107

  Fly   127 LKTIFVLFPSLQSRDFETNPESLAQFTAEIKDVYDWVWRKQFINTFLI----TIKDNVFILDPYP 187
            .:...::   |...||:         .:.|.::|.   :|:..|..|:    |...:::....:.
  Fly   108 QRNRRLV---LLKEDFQ---------PSNICNIYT---QKEQYNIALVRENFTKSKSIYTCRYFQ 157

  Fly   188 TPSI--VNKTGVWQAEEFFHKYAKNMKGYLVRTPILYDM--PRVFKSDRPTNRYEKNFIHGTSGN 248
            .|::  ||.:|   .:..|.:..:||||..:|  |:.|:  |||... :..|..|...| |...|
  Fly   158 DPNVDEVNLSG---TKPIFIEQFQNMKGKAIR--IVPDLLPPRVMLY-QDANDGELKMI-GYVAN 215

  Fly   249 LFLGFLEFVNATL----MDTSANVTA-------DYLNMTNLLDLVSQGVYETLIHSFTEITTKFV 302
            |...|.:.|||||    :..|.::|.       |.|:|...|:              ..:.|..:
  Fly   216 LITNFAQKVNATLQLDFLKPSTSITEISRMAKDDELDMGITLE--------------ASLNTSNL 266

  Fly   303 VSYSYPIGINDCCIMVPYRNQSPADQYMHEALQENVWVLISLFTLYITVAIYL--CSPLRPRDLS 365
            .:.|||..:...|:||....:.|.:  :..||..:..||..:|.|::.:::.|  ...:..:|||
  Fly   267 ETSSYPYLLTSYCLMVQVPAKFPYN--LVYALIVDPLVLGIIFVLFLLLSVLLIYSQKMSWQDLS 329

  Fly   366 AA-------FLQSICTLTYSVPTFIIRTPTLRMRYLYILLAIWGIVTSNLYISRMTSYFTTAPPV 423
            .|       .|:.:...::..|.    ..:.::|.::.:|....|:.:.:|.:.:.|:||..|..
  Fly   330 VANILLNDKSLRGLLGQSFPFPL----NASKKLRLIFTILCFASIMLTTMYEAYLQSFFTNPPSE 390

  Fly   424 RQINTVQDVVEANLRIKMLAIEYERMAKSPLQYPESYLNQVDLVDKHMLDLH------RDPFNTS 482
            .:|.:.|||...|.||.|.|:|...:.|:    ..|:..::.:.|..:.|..      ||.||.|
  Fly   391 PEICSFQDVGSYNRRIAMSALEVNGLIKT----NNSHFREIRMDDLEIFDNMPECYELRDAFNLS 451

  Fly   483 FGYTVSSDRWRFLNLQQLHLRKPIFRLT-EICEGPFYHV-FPLHKDSHMRSVMTEYIMIAQQAGL 545
            :.|.|:.||||....||...::|:|... ::|......: .||.:....|.:..|::|...:.|.
  Fly   452 YNYVVTGDRWRSYAEQQTLFKEPVFYFARDLCFSRLIFLSVPLRRHLPYRHLFDEHMMQQHEFGF 516

  Fly   546 MNHWERETFWEAVHLHRIHVHLFD-DEPMA----LSLDFFSSLLRTWTLGLILAGLAFAAEM--- 602
            :|:|...:|::.|.|..  ..|.| ..|:|    |.:|..|.:::.:...::|....|..|:   
  Fly   517 VNYWMSHSFFDMVRLGL--TSLKDLSRPLAYTPSLLMDDISWIMKIYLAAIVLCVFCFLLEIGVD 579

  Fly   603 KWHEHVTFKRRPVI 616
            ||...:.|:...::
  Fly   580 KWKRWMKFRNLQIL 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir56dNP_611432.1 ATPase-IIIA_H <312..422 CDD:273731 24/118 (20%)
Ir52bNP_725469.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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