DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir56c and Ir7f

DIOPT Version :9

Sequence 1:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster


Alignment Length:659 Identity:128/659 - (19%)
Similarity:231/659 - (35%) Gaps:210/659 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QHLLNLLAPFGRMNVFQ------EIVWFVSP---HQRLDQLDEFIMRIDEAFGKSATQ-TVVNNN 56
            ::::|:|....||...|      ::|  |:|   .:|:.     ::.:|...|...|. |..|.|
  Fly    77 EYMMNILMDSWRMVAVQLLRIRPDLV--VNPVPGRKRVS-----LLMVDSYQGLLDTNITASNAN 134

  Fly    57 TEMRMIYSSARRNHMSFVFTTGAEDPIMKVFSKVL--LGRHFY-----------VSMVIY----- 103
            .:....|         |:|....:..|.|....:|  ...||:           |.:::|     
  Fly   135 FDDPDYY---------FIFLQARDHLIPKELQLILDHCLAHFWLHCNVMIQTAQVEVLVYTYYPY 190

  Fly   104 -VDKVGDMHPI----YDLLTFAYNQQFFNSMVHFESMEGVNQLFGVSKFPVMSFENRTDFLKYMG 163
             .|.....:||    :|...:..:|.|         .:.::|:.| ....|::: ::..|::.  
  Fly   191 TADACQKAYPIPVNTFDGRKWKASQMF---------PDKLSQMHG-CPLTVLTW-HQPPFVEL-- 242

  Fly   164 KIWKQVQNARSDVGGFGFTTPLRQDL-----------------PHLFQ-SQGHYDGSTYRIIETF 210
             :|....| ||  .|.||...|.:.|                 |:.:: ::|..:|...::::..
  Fly   243 -VWDPKHN-RS--RGSGFEIQLVEHLARRMNFSLELVNIALLRPNAYRLAEGSSEGPIEKLLQRN 303

  Fly   211 VRFINGSFK------ELIMPPDSLGGQVINMKDALQLIRERKMEFCAHAYALFMSDEELEKSYPL 269
            |....|.|:      :|:..|.|.  ...|:...|||.|.|                  ..|..|
  Fly   304 VNISMGYFRKTARRNQLLTTPMSY--YSANLVAVLQLERYR------------------IGSLAL 348

  Fly   270 LVVQWCLMVPLYNSVSTYFYPLQPFDWNVWFFALGALLALVLLELMWLRMFGGWSGYRGAVLNSF 334
            ||.                    ||:.:||...|.|||..:.:.|...|......|         
  Fly   349 LVF--------------------PFELSVWMLLLLALLIHLGIHLPSARRGNEEDG--------- 384

  Fly   335 CYIINVPIEGQLQQPCLLRFLLLATV---FFHGFF----------LSAYYTSNLGSILTVNLFHA 386
                    .|.||...||....||.:   :.|.|.          |...|.|.|..::.:.|::.
  Fly   385 --------GGGLQVVALLLGAALARLPRSWRHRFIAAHWLWASIPLRISYQSLLFHLIRLQLYNT 441

  Fly   387 QINTMNDIVSAQLPVMIIDYEMEFLLNLNKELPQEFLELLRPVDSAVFSEHQTSFNSSFAYFVTE 451
            ...:::.:::.....:........||    |:||    |.|..||  .....|.|:         
  Fly   442 PSFSLDQLLAEGFQGICTANTQRLLL----EMPQ----LARDPDS--IQSVDTPFD--------- 487

  Fly   452 DHWEFLDEQQKHLKQRLFKLS------SICFGSYH-LAF-----PLQMD---------SSLWRDI 495
              |:.|:...::..:::|.::      |....|.| .||     |:.::         |.|:..:
  Fly   488 --WDVLNVLTRNRNRKIFAVANQDVTLSFLHSSAHPNAFHVVKQPVNVEYAGMYMPKHSFLYEKM 550

  Fly   496 EYFTFRIHSSGLLNFYARSSFGSALHAGLVQRMPDTQEYTSAGLQHLAIAFILLLV--MSFLAGI 558
            :....|:.:||.::.:.|:||.|      |.|.......:...:.|..::.|.:::  :..|||:
  Fly   551 DDDIRRLDASGFIHAWRRASFAS------VHRKEQVHMTSRRYINHAKLSGIYMVMAGLYLLAGL 609

  Fly   559 VFVLETLSR 567
            :|..|.|.|
  Fly   610 LFAGEVLLR 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir56cNP_611431.1 None
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:304360 32/173 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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