DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir56c and Ir100a

DIOPT Version :9

Sequence 1:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster


Alignment Length:524 Identity:105/524 - (20%)
Similarity:196/524 - (37%) Gaps:104/524 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 HFESMEGVNQ-------LFGVSKFPVMSFENRT---DFL--KYMGKIWKQ--------VQNARSD 175
            ||...:||:|       ||....|.:::.||.|   |.|  ::...:|.|        ||.::..
  Fly    84 HFFIFDGVHQMQEIRTSLFNTDGFYILALENNTIEDDVLLMEFAADVWLQHGHSRIYYVQLSKKS 148

  Fly   176 VGGFGFTTPLRQDLPHLFQS----------QGHY------------------------DGSTYRI 206
            |..|   .|..|.|..:..|          :|::                        .|:..::
  Fly   149 VLLF---NPFLQRLVVVQDSKTYSRIYKDLEGYHLRIYIFDSVYSSVIGDGENKVLSVTGADAKL 210

  Fly   207 IETFVRFINGSFKELIMPPDS-LGGQVINMKDALQLIRERKMEFCAHAYALFMSD---EELEKSY 267
            .:|..|.:|.: .:.:.|.|. .||::.|.:.:..:.|..:.|........|:.|   ..::.|.
  Fly   211 AKTVARQLNFT-ADFVWPDDEFFGGRLANGEYSGGVGRAHRGEVDIIFAGFFIKDYLTTHIQFSA 274

  Fly   268 PLLVVQWCLMVPLYNSVSTYFYPLQPFDWNVW--FFALGALLALVLLELMWLRMFGGWSG----- 325
            .:.:.:.||.|.....:.....||.....:||  |..:|.|.|||.|.|..:.:..|..|     
  Fly   275 AVYMDELCLYVKKAQRIPQSILPLFAVHMDVWLCFLLVGLLGALVWLILRAVNLILGIEGVPDGS 339

  Fly   326 ------YRGAVLNSF--CYIINVPIEGQLQQPCLLRFLLLATVFFHGFFLSAYYTSNLGSILTVN 382
                  |.||....|  .::|.|.:......|.....:.:|::........|...|:|.::....
  Fly   340 RATRISYFGAARRIFVDTWVIWVRVNVGRFPPFHSERIFVASLCLVSVIFGALLESSLATVYIRP 404

  Fly   383 LFHAQINTMNDIVSAQLPVMIID--YEMEFLLNLNKELPQEFLELLRPVDSAVF--SE------H 437
            |::..:||:.::..:..|:.|..  ::.:.....|.       |:.|.:|:.:.  :|      .
  Fly   405 LYYRDVNTLRELDESGQPIYIKHPAFKDDLFYGHNS-------EVYRRLDAKMMLVAEGEERLIE 462

  Fly   438 QTSFNSSFAYFVTEDHWEFLDEQQKHLKQRLFKLSSICFGSYHLAFPLQMDSSLWRDIEYFTFRI 502
            ..|....|| .||......|.:.:..:.:::.|:.. |..:||:|:.|...|....::.....|:
  Fly   463 MVSKRGGFA-GVTRSASLQLSDIRYVMTKKVHKIPE-CPKNYHIAYVLPRPSPYLEEVNRIVLRL 525

  Fly   503 HSSGLLNFYARSSFGSALHAGLVQRMP------DTQEYTSAGLQHLAIAFILLLVMSFLAGIVFV 561
            .:.|::..:...:...|..:  :||.|      |...:....|..:.:||..|.:...|:.||.:
  Fly   526 VAGGIVGLWTGEAKERAKWS--IQRFPEYLAELDVGRWKVLTLSDVQLAFYALTIGCLLSAIVCM 588

  Fly   562 LETL 565
            .|.|
  Fly   589 AEIL 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir56cNP_611431.1 None
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 10/45 (22%)
Lig_chan <439..580 CDD:278489 29/151 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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