DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir56c and Ir68b

DIOPT Version :9

Sequence 1:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster


Alignment Length:639 Identity:120/639 - (18%)
Similarity:214/639 - (33%) Gaps:217/639 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VSPHQRLDQLDEFIMRIDEAFGKSATQTVVNNNTEMRMIYSSARRNHMS---FVFTTGAEDPIMK 85
            :.|.:|.|.|..|.:...|. |.|..:.:::      |:....||.||.   ||:.......:::
  Fly    78 LEPFRRTDSLSIFQIPAAEK-GDSLVRRILD------MLNPHQRRKHMHKYLFVWPNAGRHQLLR 135

  Fly    86 VFSKVLLGRHFYVSMVIY-VDKVGDMHPIYDLLTFAYNQQFFNSMVHFESMEGVNQLFGVSKFPV 149
            :|      |..:...::| :...|..:..:|...||:.           .::.:.:|.|      
  Fly   136 LF------RGSWAKKLLYGLAITGRENGTFDFDPFAWG-----------GLQVIQRLDG------ 177

  Fly   150 MSFENRTDFLKYMGKIWKQVQNAR--SDVGGFG-----FTTPLRQDLPHLFQSQGH--YDGSTYR 205
                              :|..||  .|:.|:.     ||.||........::.|:  .||...|
  Fly   178 ------------------EVPYARKVKDLRGYPLRFSMFTDPLMAMPRSPVETAGYQAVDGVAAR 224

  Fly   206 II----------------ETFVRFI-NGSFKELIMPPDSLGGQVINMKDALQLIRERKMEFCAHA 253
            ::                |::.|.: ||::..::  .|.:||                     |.
  Fly   225 VVGEMLNASVTYVFPEDNESYGRCLPNGNYTGVV--SDIVGG---------------------HT 266

  Fly   254 Y----ALFMSD---EELEKSYPLLVVQWCLMVPLYNSVSTYFYPLQPFDWNVWFFALGALLALVL 311
            :    :.|:.|   ..:|..||.......|:||.......|...::.|...||:..|..||.:||
  Fly   267 HFAPNSRFVLDCIWPAVEVLYPYTRRNLHLVVPASAIQPEYLIFVRVFRRTVWYLLLVTLLVVVL 331

  Fly   312 L-------------------ELMW---LRMFGGWSGYRGAVLNSFCYIINVPIEGQLQQPCLLRF 354
            :                   :..|   |.|||...             :..| .|:|.....:|.
  Fly   332 VFWVMQRLQRRIPRRGVIQFQATWYEILEMFGKTH-------------VGEP-AGRLSSFSSMRT 382

  Fly   355 LLLATVFFHGFFLSAYYTSNLGSILTVNLFHAQINTMNDIVSAQLPVMII------------DYE 407
            .|:..:.| .:.||..|.:.|.|......:..|::.::|:|...:.:..:            :::
  Fly   383 FLMGWILF-SYVLSTIYFAKLESGFVRPSYEEQVDRVDDLVHLDVHIYAVTTMYDAVRSALTEHQ 446

  Fly   408 MEFLLNLNKELP-----QEFLELLRPVDSAVFSEHQTSFNSSFAYFVTEDHW--EFL----DEQQ 461
            ...|.|.:::||     ..:..::|..|..             |.|:..|..  :||    |.|.
  Fly   447 YGLLENRSRQLPLGIATSYYQPVVRRRDRR-------------AAFIMRDFHARDFLAITYDSQA 498

  Fly   462 K----HLKQRLFKLSSICFGSYHLAFPLQMDSSLWRDIEYFTFRIHS--SGLLNFYARSSFGSAL 520
            :    |:.:...: |.||      .:.|...|.       |..|:.|  ||   |.....|....
  Fly   499 ERPAYHIAREYLR-SMIC------TYILPRGSP-------FLHRLESLYSG---FLEHGFFEHWR 546

  Fly   521 HAGLVQRM---PDTQEY---------TSAGLQHLAIA-FILLLVMSFLAGIVFV 561
            ...|:.|:   ||.:|:         |.:|...|||. ..::|.:..|.|..::
  Fly   547 QMDLITRVGASPDAEEFLEDLGDQTDTDSGSNELAIRNKKVVLTLDILQGAFYL 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir56cNP_611431.1 None
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 58/313 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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