DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir56c and Ir60e

DIOPT Version :9

Sequence 1:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_611927.3 Gene:Ir60e / 37917 FlyBaseID:FBgn0035019 Length:572 Species:Drosophila melanogaster


Alignment Length:608 Identity:134/608 - (22%)
Similarity:218/608 - (35%) Gaps:152/608 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QLDEFIMRIDEAFGKSATQTVVNNNTEMRMIYSSARRNHM----------SFVFTTGAEDPIMKV 86
            :|:.||     .|...||..:::.....|::.||..|...          |.:......|..:..
  Fly    41 ELNVFI-----DFECCATSEILHKLDSPRILLSSNSREARDLRIRGNFTESTLIIVSVMDSDLNP 100

  Fly    87 FSKVLLGRHFYVSMVIYVDKVGDMH-----------PIYDLLTFAYNQQFFNSMVHFESMEGVNQ 140
            ....||.|        .:|::.::|           |..||.|:.:.:.|.|  |...|.:|:..
  Fly   101 LVASLLPR--------LLDELHELHIVFLSNEEPGFPKQDLYTYCFKEGFVN--VILMSGKGLYS 155

  Fly   141 LFGVSKFPVMSFENRTDFLKYMGKIWKQVQNARSDVGGFGFTTP-LRQDL-PHLFQSQGHYDG-- 201
            .........:|..|.:::.. ..:|.:..|         ||... ||..| |..|:......|  
  Fly   156 YLPYPSIQPISLSNVSEYFD-RARIIRNFQ---------GFPVRILRSTLAPRDFEYSNEQGGLV 210

  Fly   202 -----------STYRIIETFVRFINGSFKELIMPPDSLGGQVINMKDALQLIRERKMEFCAHAYA 255
                       .|||...|.         |.:..|| |....:.:..| :::..:|::.     .
  Fly   211 RAGYLFTAVKELTYRYNATI---------ESVPIPD-LPEYDVYLAVA-EMLHTKKIDI-----V 259

  Fly   256 LFMSDEELEKSY--PLLVVQWCLMVPLYNSVSTYFYPLQPFDWNVWFFALGALL-ALVLLELMWL 317
            .:..|..||.:|  ||.:::...|.|....:|:|.|..:||.|.:|...:..:| ..|:|.|   
  Fly   260 CYFKDFSLEVAYTAPLSIIREYFMAPHARPISSYLYYSKPFGWTLWAVVISTVLYGTVMLHL--- 321

  Fly   318 RMFGGWSGYRGA-------VLNSFCYII-------------NVPIEGQLQQPCLLRFLLLATVFF 362
                   ..|||       :|.|..:|:             :|.|.|.|.              .
  Fly   322 -------AARGARVEIGKCLLYSLSHILYNCHQKIRVAGWRDVAIHGILT--------------I 365

  Fly   363 HGFFLSAYYTSNLGSILTVNLFHAQINTMNDIVSAQLPVMIIDY---EMEFLLNLNKELPQEFLE 424
            .||.|:..|.:.|.||||..|:..:.||:.|:..|..|.:..:|   :|:....|.:.|.:..|.
  Fly   366 GGFILTNVYLATLSSILTSGLYDEEYNTLEDLARAPYPSLHDEYYRSQMKAKTFLPERLRRNSLS 430

  Fly   425 LLRPVDSAVFSEHQTSFNSSFAYFVTEDHWEFLDEQQKHLKQRLFK---------LSSICFGSYH 480
            |    ::.:...::...|.|:.|.:.||..|.:..||..||...|.         |.|.|..:  
  Fly   431 L----NATLLKAYRDGLNQSYIYILYEDRLELILMQQYLLKTPRFNMIRQAVGFTLESYCVSN-- 489

  Fly   481 LAFP-LQMDSSLWRDIEYFTFRIHSSGLLNFYARSSFGSALHAGLVQRMPDTQEYTSA-GLQHLA 543
             :.| |.|.|...|       |:...|:.......:|...:|.|:...|.|.:....| .|.:..
  Fly   490 -SLPYLAMTSEFMR-------RLQEHGISIKMKADTFRELIHQGIYTLMRDDEPPAKAFDLDYYF 546

  Fly   544 IAFILLLVMSFLAGIVFVLETLS 566
            .||:|..|....:.:||..|.:|
  Fly   547 FAFVLWTVGLISSLLVFFAELVS 569



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.