DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir56c and Ir54a

DIOPT Version :9

Sequence 1:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_611259.2 Gene:Ir54a / 37022 FlyBaseID:FBgn0034272 Length:586 Species:Drosophila melanogaster


Alignment Length:597 Identity:118/597 - (19%)
Similarity:220/597 - (36%) Gaps:150/597 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 MSFVFTTGAEDPIMKVFSKV-----LLGRHFYVSMVIYVDKVGDMHPIYDLLTF----------- 119
            :.|:|...||..:..:..::     ...:..:.:..|.|..:.|.....::..|           
  Fly    21 VDFIFRAAAEHSLSVIMIRIDYCPYNWAKDIFENQTIPVVVLSDSETFINIRMFSRPLHVACLPG 85

  Fly   120 -------AYNQQFFNSMVHFESMEGVNQLFGVSKFPVMSFENRTDFL---KYMGKIWKQVQNARS 174
                   |..:.|.:|::.|.|.:.:  ::..:.|   |...|.|::   .|..:||..|....|
  Fly    86 HELQKDLALLENFTSSLMDFPSQKKI--VYISNNF---SDPTRMDYIFETCYHRRIWNIVGLLAS 145

  Fly   175 DVGGFGFTTPLRQDLPHLFQSQGHYDGSTYRIIETFVRFINGSFKEL------IMP----PDSL- 228
            |...:.:..       ||:.|    ..:.||.:|:...| :..|..:      :||    |.|: 
  Fly   146 DEHRYFYRY-------HLYPS----FRTEYRSLESSTIF-DKDFPNMHGHPLTVMPDQWLPRSVL 198

  Fly   229 ------GGQVI-------------NMKDALQL--------------IRERKMEFCAHAYALFMSD 260
                  |.|::             .:...|||              ::|....|.....|.....
  Fly   199 YVDRRTGKQILAGSVGRFFHVLSWKLNATLQLSKKVTTGRFLNATALKELSESFSVDVPASLTIM 263

  Fly   261 EELEK----SYPLLVVQWCLMVPLYNSVSTYFYPLQPFDWNVWFF---ALGALLALVL-----LE 313
            |.:|:    |||:.|...|||||:...:     |::    :::|.   |....||:|:     |.
  Fly   264 ERVEQLASTSYPMEVTHVCLMVPVARRI-----PIK----DIYFILSSASNMFLAIVIVSSYGLA 319

  Fly   314 LMWLRMFG-----------GWSGYRGAVLNSFCYIINVPIEGQLQQPCLLRFLLLATVFFHGFFL 367
            |..||...           .....||.:..||    |:|:.....  ..|.||:|..|   |..:
  Fly   320 LNLLRNMTHRDVRLVDFVLNDKALRGILGQSF----NLPLSRSFS--TRLIFLMLGIV---GLNV 375

  Fly   368 SAYYTSNLGSILTVNLFHAQINTMNDIVSAQLPVMIIDYEMEFLLNLNKELPQEFLELLRPVDSA 432
            |:.:.:.|.:::.......|..:...:...::|  ::..|.:|...:...:|      :..|:.:
  Fly   376 SSIFGAGLDTLMAHPPRQFQARSFAGLRRTKIP--LVTTEEDFPTWMKLRVP------MLVVNVS 432

  Fly   433 VFSEHQTSFNSSFAYFVTEDHWEFLDEQQKHLKQRLFKLSS-ICFGSYH-LAFPLQMDSSLWRDI 495
            .::..:...|:|.|||.:..:|....||||...:.||..|: .|..|.. |:|....:|.....:
  Fly   433 EYNHLRNGRNTSNAYFASRLYWNLFSEQQKRFTRELFIYSTDDCLWSLALLSFQWPQNSLFTEPV 497

  Fly   496 EYFTFRIHSSGLLNFYARSSFGSALHAGL------VQRMPDTQEYTS---AGLQHLAIAFILLLV 551
            ......::::||.:|:....:.....|||      ..::.:.:..||   ...|.:..|:...:|
  Fly   498 SQLILEVNANGLYDFWVGMHYYDMTAAGLSGLEDPSLQLKEREHPTSLRIVDFQWMWQAYGTFMV 562

  Fly   552 MSFLAGIVFVLE 563
            ::.|   ||:||
  Fly   563 IAIL---VFLLE 571



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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