DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir56c and Ir48c

DIOPT Version :9

Sequence 1:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster


Alignment Length:546 Identity:115/546 - (21%)
Similarity:224/546 - (41%) Gaps:100/546 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NHMSFVFTTGAEDPI----------------MKVFSKVLLGRHFYVSMVIYVDKVGDMHPIYDLL 117
            :::|..|.|..::|:                :.|....|..|.:  :.::.:|...:....|..:
  Fly    62 HNISEEFKTYHDEPVLIIIRLERDLNLNLATLDVLRSYLTDRQY--NDILLIDNDEENLNSYVDI 124

  Fly   118 TFAYNQQFFNSMVHFESMEGVNQLFGVSKFPVMSFENRTDFLKYMGKIWKQVQNARSDVGGFGFT 182
            ..||....|:.::.:.|.:   :.:.:..:|.:.. ..|...:|:     :.:|.|:.:|     
  Fly   125 RKAYWNAGFSQVLIYNSQQ---RTWSIKPYPYLQI-RPTSLKEYI-----ENRNTRNLMG----- 175

  Fly   183 TPLR----QDLPHLF-------QSQGHYDGSTYRIIETFVRFINGS-----FKELIMPPDSLGGQ 231
            .|||    .|.||.|       .|...|.||...:::.|...:|.:     |:|.         :
  Fly   176 YPLRVLVTNDPPHCFVDKDELPGSPNRYKGSIVTMLKIFADQLNATFQANPFREF---------R 231

  Fly   232 VINMKDALQLIRERKMEFCAHAYALFMSDEELEKSYPLLVVQWCLMVPLYNSVSTYFYPLQPFDW 296
            ..:..|.:|::.:.:::.|.   ::|:.......|.|:.:.:..:|.|..|.:..::|..:|||.
  Fly   232 RYSTADCVQMVSDDEIDACG---SIFIRTYTYATSQPVRLNRVVIMAPFGNPIEKFYYFFRPFDL 293

  Fly   297 NVWFFALGALLALVLLELM------WLRMFGGWSGYRGAVLNSFCYIINVPIEGQLQQPCLL--- 352
            .||   :|..:.:|.:.:|      |  .|..|        |...|:: :.::..|.:...|   
  Fly   294 YVW---IGTGIIVVYIAVMGSLLHRW--HFKEW--------NVGQYLL-LAVQTLLNRELSLPQS 344

  Fly   353 ----RFLLLATVFFHGFFLSAYYTSNLGSILTVNLFHAQINTMNDIVSAQLPVMIIDYEM--EFL 411
                :|:||..:|..||.||..|.:.|..:||..|:...|..:.|:.:|.:.:::..:.:  ..:
  Fly   345 SSGSKFMLLLLLFAIGFILSNLYVALLSMMLTTKLYQRPIENLADLKAANVNILLQTHNIRPNSV 409

  Fly   412 LNLNKELPQEFLELLRPVDSAVFSEHQTSFNSSFAYFVTEDHWEFLDEQQKHLKQRLFKLSSICF 476
            ...::||.:.||    .|:.:...|.:...:.|:||..:||..:|...|||.|::|..|..|...
  Fly   410 YGSSEELRERFL----LVEESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLRRRRMKKLSNPV 470

  Fly   477 GSYHLAFPLQMDSSLW---RDIEYFTFRIHSSGLLNFYARSSFGSALHAGLVQRMP-DTQEYTSA 537
            |   ..:.:|:....|   :.......|...:||.|.........|:.||.:...| .||.....
  Fly   471 G---YTWAVQVIKQNWVLEKHYNDHVQRFFETGLQNKLVDDVHELAVKAGFLHFFPTQTQTIEPL 532

  Fly   538 GLQHLAIAFILLLVMSFLAGIVFVLE 563
            .|:.:.:|.::|.....||.|.|::|
  Fly   533 RLEDIVMAAMVLGGGHALAVICFLVE 558



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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