Protein Alignment Ir56c and Ir40a

DIOPT Version :10

• Sequence 1: NP_611431.1
• Gene: Ir56c / 37251
• FlyBaseID: FBgn0034457
• Length: 567
• Species: Drosophila melanogaster
• Sequence 2: NP_610140.4
• Gene: Ir40a / 35449
• FlyBaseID: FBgn0259683
• Length: 732
• Species: Drosophila melanogaster
• Alignment Length: 718
• Identity: 127/718 - (17%)
• Similarity: 225/718 - (31%)
• Gaps: 252/718 - (35%)

  Fly    24 VSPHQRLDQLDEFIMRIDEAFGKSATQTVVNNNTEM-----------------------RMIYSS 65
            |...:|...||:|:.|:.    :|..::||.:.||:                       ..:.:|
  Fly    62 VCQKERNVYLDDFLQRLH----RSNYKSVVFSQTELFFQHIEENLQGANECISLILDEPNQLLNS 122

  Fly    66 ARRNHMS-----FVFTTGAEDPIMKVFSKVLLGRHFYVSMVIYVDKVGDMHPIYDLLTFAYNQ-- 123
            ....|:.     |:|..||..|   ..|:|:..|.....:|:       ..|........|||
  Fly   123 LHDRHLGHRLSLFIFYWGARWP---PSSRVIRFREPLRVVVV-------TRPRKKAFRIYYNQAR 177

  Fly   124 -------QFFNSMVHFESMEGVNQLFGVSKFPVM--------SFENRTDFLKYMGKIWKQVQNAR 173
                   |..|      ..:|.|  .|:.:.|::        :|:.||
  Fly   178 PCSDSQLQLVN------WYDGDN--LGLQRIPLLPTALSVYANFKGRT----------------- 217

  Fly   174 SDVGGFGFTTPLRQDLP--------HLFQSQGHYD--------------GSTYRIIETFVRFING 216
                   |..|:....|        :.|:....::              |..:|::....:.:|.
  Fly   218 -------FRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNF 275

  Fly   217 SFKELIMPPDSLG------GQVIN--MKDALQLIRERKMEFCAHAYALFMSD--------EELEK 265
            .||.:..|..:.|      |:..|  ....:.|::..:.:|       |:.|        :.:|.
  Fly   276 RFKYIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQADF-------FLGDVGLSWERRKAIEF 333

  Fly   266 SYPLLVVQWCLMVPLYNSVSTYFYPLQPFDWNVW-------FFALGALLALVLLELMWLRMFGGW 323
            |:..|.............::.....::||..::|       .|:......::.|..:|.|.   |
  Fly   334 SFFTLADSGAFATHAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWRRR---W 395

  Fly   324 SG----YRGAVLNSFCYIINV----------------PIEGQLQQPCL---LRFLL--------- 356
            :.    :.|.:.....|:..:                .:..||.|.|:   ||..|
  Fly   396 ANSDVEHLGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHN 460

  Fly   357 ------LATVFFHG--FFLSAYYTSNLGSILTVNLFHAQINTMNDIVSAQLPVMIID-------- 405
                  |..|::..  :.|:..|::.|.|..........|||:..:.:|    ||.|
  Fly   461 GYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQAA----MIHDGYRLYVEK 521

  Fly   406 --YEMEFLLNLNKELPQEFLELLRPVDSAVFSEHQTSFNSSFAYFVT-------------ED--- 452
              ..:|.|.| ..||.::...|:|          |...|....:|:.             ||
  Fly   522 ESSSLEMLEN-GTELFRQLYALMR----------QQVINDPQGFFIDSVEAGIKLIAEGGEDKAV 575

  Fly   453 ----HWEFLDEQQKHLKQRLFKLSSICFGSYHLAFPLQMDSSLWRDIEYFTFRIHSSGLLNFYAR 513
                ...|.:.||  .....|:||...:..|. |..:|:.......:.....::..||:|:....
  Fly   576 LGGRETLFFNVQQ--YGSNNFQLSQKLYTRYS-AVAVQIGCPFLGSLNNVLMQLFESGILDKMTA 637

  Fly   514 SSF--------GSALHAGLVQRMPD-----TQEYTSA-----GLQHLAIAFILLLVMSFLAGIVF 560
            :.:        .:.::.|.||....     |:.|.|.     .|:.|..|||.|.|.|..||::.
  Fly   638 AEYAKQYQEVEATRIYKGSVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALGVGSLAAGVIL 702

  Fly   561 VLE 563
            :||
  Fly   703 LLE 705

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ir56c	NP_611431.1	None
Ir40a	NP_610140.4	Lig_chan-Glu_bd	<265..336	CDD:463166	13/77 (17%)
		Periplasmic_Binding_Protein_Type_2	297..>391	CDD:473866	13/100 (13%)
		Periplasmic_Binding_Protein_Type_2	<496..637	CDD:473866	31/158 (20%)