DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir56b and Ir100a

DIOPT Version :9

Sequence 1:NP_611430.1 Gene:Ir56b / 37250 FlyBaseID:FBgn0034456 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster


Alignment Length:480 Identity:92/480 - (19%)
Similarity:169/480 - (35%) Gaps:139/480 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IFNE--TQFVVPKFCGPYMEIVKHFAEVYHYQLFL-DSLESLPKKSVV---EQDIIS-------- 75
            :||.  .:.||.:....|..|.|.. |.||.:::: ||:.|    ||:   |..::|        
  Fly   151 LFNPFLQRLVVVQDSKTYSRIYKDL-EGYHLRIYIFDSVYS----SVIGDGENKVLSVTGADAKL 210

  Fly    76 ----------------------------------------GKYNLSLHGVIIRPEETSDF-FNAT 99
                                                    |:.::...|..|:...|:.. |:|.
  Fly   211 AKTVARQLNFTADFVWPDDEFFGGRLANGEYSGGVGRAHRGEVDIIFAGFFIKDYLTTHIQFSAA 275

  Fly   100 QHSYPLELMTNCVMVPLAPELPKWMYMVWPLGKYIWTC-LFLGTF--YVALLLRYVHW------- 154
            .:...|     |:.|..|..:|:.:..::.:...:|.| |.:|..  .|.|:||.|:.       
  Fly   276 VYMDEL-----CLYVKKAQRIPQSILPLFAVHMDVWLCFLLVGLLGALVWLILRAVNLILGIEGV 335

  Fly   155 REPGNATR-SY---TRNVLHAMALLMFSANMNMSVKLKHASIRVIIFYTLLYIFGFILTNYHLSH 215
            .:...||| ||   .|.:.....::....|:..........|.|.....:..|||.:|.    |.
  Fly   336 PDGSRATRISYFGAARRIFVDTWVIWVRVNVGRFPPFHSERIFVASLCLVSVIFGALLE----SS 396

  Fly   216 MTAFDMKPVFLRPIDTWSDLIHSRLRIVI-HDSLLEELRW---LPVYQAL--------------- 261
            :....::|::.|.::|..:|..|...|.| |.:..::|.:   ..||:.|               
  Fly   397 LATVYIRPLYYRDVNTLRELDESGQPIYIKHPAFKDDLFYGHNSEVYRRLDAKMMLVAEGEERLI 461

  Fly   262 --------LASPSRSYAYVVTQDAWLFFNRQQKVLIQP-YFHLSKVCFGGLFNALPMASNASFAD 317
                    .|..:||.:..::...::...:..|:...| .:|::.|        ||..|  .:.:
  Fly   462 EMVSKRGGFAGVTRSASLQLSDIRYVMTKKVHKIPECPKNYHIAYV--------LPRPS--PYLE 516

  Fly   318 SLNKFILNVWQAGLWNYWEELAFRYAEQAGYAKVFLDTYPV----------EPLNLEFFTTAWIV 372
            .:|:.:|.:...|:...|.      .|....||..:..:|.          :.|.|.....|:..
  Fly   517 EVNRIVLRLVAGGIVGLWT------GEAKERAKWSIQRFPEYLAELDVGRWKVLTLSDVQLAFYA 575

  Fly   373 LSAGIPISSLAFCLELFIHRRKQRR 397
            |:.|..:|::....|:.:.|  |||
  Fly   576 LTIGCLLSAIVCMAEILLGR--QRR 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir56bNP_611430.1 None
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 1/44 (2%)
Lig_chan <439..580 CDD:278489 25/156 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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