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Protein Alignment Ir56b and Ir7c

DIOPT Version :9

Sequence 1:	NP_611430.1	Gene:	Ir56b / 37250	FlyBaseID:	FBgn0034456	Length:	408	Species:	Drosophila melanogaster
Sequence 2:	NP_001245572.1	Gene:	Ir7c / 31692	FlyBaseID:	FBgn0029966	Length:	625	Species:	Drosophila melanogaster

Alignment Length:	382	Identity:	74/382 - (19%)
Similarity:	140/382 - (36%)	Gaps:	110/382 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    73 IISGKYNLSLHGVIIRPEETSDFFNATQH-SYPLELMTNCVMVPLAPELPKWMYMVWPLGKYIWT 136
            ::.|:.||:....:.....:.....:|.: |:|:.|     :||....:.....:..|....||:
  Fly   286 MVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPIVL-----VVPSGGSISPMGRLTRPFRYIIWS 345

  Fly   137 CLFLGT---FYVALLLRYVHWREPGNATRSYT---RNVLHAM--------ALLMFSANMNMSVKL 187
            |:.:..   |.:..||:..  ..||  .|:..   ||.|..|        .|.:::...|.:
  Fly   346 CILVSLIFGFVLICLLKIT--ALPG--LRNLVLGRRNRLPFMGMWASLLGGLALYNPQRNFA--- 403

  Fly   188 KHASIRVIIFYTLLYIFGFILTNYHLSHMTAFDMKPVFLR-PIDTWSDLIHSRLRIVIHDSLLEE 251
                 |.|:...||..  .||...:...:... ::.|.:| ||.:.|:::....          |
  Fly   404 -----RYILVMWLLQT--LILRAAYTGQLYLL-LQDVEMRSPIKSLSEVLAKDY----------E 450

  Fly   252 LRWLPVYQALL--ASPSRSYAYVVTQDAWLFFNRQQK------VLIQPYF------------HLS 296
            .|.||..:.:.  :.|:.::..|::.:..|:..|.:.      .|:||..            ||:
  Fly   451 FRILPALRTIFKDSMPTTNFHAVLSLEESLYRLRDEDDPGITVALLQPTVNQFDFRSGPNKRHLT 515

  Fly   297 KVCFGGLFNALP-----------MASNASFADSLNKFILNVWQAGLWNYWEELAFRYAEQAGYAK 350
                     .||           |..::.|...:::.|:.:..:|:             .|.|.|
  Fly   516 ---------VLPDPLMTAPLTFYMRPHSYFKRRIDRLIMAMMSSGI-------------VARYRK 558

  Fly   351 VFLDTYP-------VEPLNLEFFTTAWI-VLSAGIPISSL-AFCLELFI--HRRKQR 396
            :::|...       :||..|..:..:.| |..||:.:.:| .|.||:..  |||.:|
  Fly   559 MYMDRIKRVSKRRNLEPKPLSIWRLSGIFVCCAGLYLVALIVFILEILTTNHRRLRR 615

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.