DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hpo and AT4G24100

DIOPT Version :10

Sequence 1:NP_611427.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001328320.1 Gene:AT4G24100 / 828510 AraportID:AT4G24100 Length:725 Species:Arabidopsis thaliana


Alignment Length:726 Identity:187/726 - (25%)
Similarity:290/726 - (39%) Gaps:175/726 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KVFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLVPVE---SDLHEIIKEISIMQQCDSPYVVRYY 101
            |.:.:|.::|.|:...||:|::..::.:||||.:.::   |:|.:|.:|...|...|.|.|::.:
plant    47 KDYKLMEEIGHGASAVVYRAIYLPTNEVVAIKCLDLDRCNSNLDDIRRESQTMSLIDHPNVIKSF 111

  Fly   102 GSYFKQYDLWICMEYCGAGSVSDIMRLR-KKTLTEDEIATILSDTLQGLVYLHLRRKIHRDIKAA 165
            .|:...:.||:.|.:...||...:|:.. .....|..|..:|.:||:.|.|||.:..||||:||.
plant   112 CSFSVDHSLWVVMPFMAQGSCLHLMKTAYSDGFEESAICCVLKETLKALDYLHRQGHIHRDVKAG 176

  Fly   166 NILLNTEGYAKLADFGVAGQLTDT---MAKRNTVIGTPFWMAPEVIEE-IGYDCVADIWSLGITA 226
            ||||:..|..||.||||:..|.|.   ...|||.:|||.||||||::. .||:..|||||.||||
plant   177 NILLDDNGEIKLGDFGVSACLFDNGDRQRARNTFVGTPCWMAPEVLQPGNGYNSKADIWSFGITA 241

  Fly   227 LEMAEGKPPYGEIHPMRAIFMIPQKPPP--SFREPDRWSTEFIDFVSKCLVKEPDDRATATELLE 289
            ||:|.|..|:.:..||:.:.|..|..||  .:....::|..|.:.|:.||||:...|.||.:||:
plant   242 LELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 306

  Fly   290 HEFIRNAK----------------------------HRSILKPML---EETCAIREQQRA----- 318
            |...::.|                            .:..||.|.   ||..:..|.||.     
plant   307 HSCFKHTKPPEQTVKILFSDLPPLWTRVKSLQDKDAQQLALKRMATADEEAISQSEYQRGVSAWN 371

  Fly   319 ---------------------NRSFGGVLAASQAK---------SLATQENGMQQHITDNAFMED 353
                                 ::....:|.|...|         ||...||...:....|..:|:
plant   372 FDVRDLKTQASLLIDDDDLEESKEDEEILCAQFNKVNDREQVFDSLQLYENMNGKEKVSNTEVEE 436

  Fly   354 PGTLVPEKFGEYQQSSASDATMIAHAEQGVDEGTLGP-------GGLRN---LSKAAAPAA---A 405
            |  ...||| .:..:::|...|..::|..:.|..:.|       |.|.:   ||.:|:..:   .
plant   437 P--TCKEKF-TFVTTTSSLERMSPNSEHDIPEAKVKPLRRQSQSGPLTSRTVLSHSASEKSHIFE 498

  Fly   406 SSAASPLDMPAVDSGTMVELESNLGTMVINSDSDDSTTAKNNDDQKPRNRYRPQFLEHFDRKNAG 470
            .|.:.|...|.|..........||           ||.|.:|....| .:|...|.:..|.|:..
plant   499 RSESEPQTAPTVRRAPSFSGPLNL-----------STRASSNSLSAP-IKYSGGFRDSLDDKSKA 551

  Fly   471 D----GR----------GDEKP--IATEYSPAAAEQQQQQQQQQQQQQQDEQHLASGANDLNNWE 519
            :    ||          ..:.|  |....||.|...::                   :..:.||.
plant   552 NLVQKGRFSVTSGNVDLAKDVPLSIVPRRSPQATPLRK-------------------SASVGNWI 597

  Fly   520 HNMEMQFQQISAINQYGLQ-----------QHQQQQQVLMAYPLMNEQLIALNNQPNLLLSNAAP 573
            ...:|...|...|.::...           ||..||..:....:||            ||::..|
plant   598 LEPKMPTAQPQTIKEHSSHPTSSSPIMPQLQHLFQQNSIQQDLIMN------------LLNSLQP 650

  Fly   574 MGQQGIPAAAPAQPPPAYQNQHMHTQSHAYVE---GEFEFLKFLTFDDLNQRLCNIDHEMELE-- 633
            :  :....:...:.||.     ..:.|:..||   .|.|.|...:..||..||.::..|:::|  
plant   651 V--EATEGSQSGKLPPL-----PRSDSNGNVEPVASERERLLLSSISDLRARLDDLTEELDIEKS 708

  Fly   634 -IEQLNKKYNA 643
             ..||.:|..|
plant   709 KYSQLQQKLKA 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_611427.1 STKc_MST1_2 38..293 CDD:132943 101/262 (39%)
SARAH_Hpo 606..661 CDD:439183 13/41 (32%)
AT4G24100NP_001328320.1 STKc_OSR1_SPAK 47..310 CDD:270787 101/262 (39%)

Return to query results.
Submit another query.