DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and Myo3a

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_680779.3 Gene:Myo3a / 667663 MGIID:2183924 Length:1621 Species:Mus musculus


Alignment Length:344 Identity:139/344 - (40%)
Similarity:204/344 - (59%) Gaps:38/344 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PEKVFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLV-PVESDLHEIIKEISIMQQ-CDSPYVVRY 100
            |...::|:..:|:|:||.|:|.::|:|....|:|:: |:.....||..|.:|::. .|.|.|||:
Mouse    25 PSDTWEIIETIGKGTYGKVFKVLNKKSGQKAAVKILDPIHDIDEEIEAEYNILRTLSDHPNVVRF 89

  Fly   101 YGSYFKQ-----YDLWICMEYCGAGSVSDIMR---LRKKTLTEDEIATILSDTLQGLVYLHLRRK 157
            ||.|||:     ..||:.:|.|..|||:|:::   .|.:.::|..||.||.:.|.||.:||..:.
Mouse    90 YGIYFKKDKINGDKLWLVLELCNGGSVTDLVKGFLKRGERMSEPVIAYILHEALMGLQHLHSNKT 154

  Fly   158 IHRDIKAANILLNTEGYAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIE-----EIGYDCVA 217
            ||||:|..||||.|||..||.||||:.||:.|..:.||.:|||||||||||.     :..||...
Mouse   155 IHRDVKGNNILLTTEGGVKLVDFGVSAQLSSTRHRLNTSVGTPFWMAPEVIACEQQLDTTYDARC 219

  Fly   218 DIWSLGITALEMAEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWSTEFIDFVSKCLVKEPDDRA 282
            |.|||||||:|:.:|.||..|:|||||:|.||:.|||..|:|:.||.||.||:||||.|:.:.|.
Mouse   220 DTWSLGITAIELGDGDPPLAELHPMRALFKIPRNPPPKLRQPELWSAEFNDFISKCLTKDYEKRP 284

  Fly   283 TATELLEHEFIRNAKHRSIL--KPMLE---------ETCAIREQQ------RANRSFGGVLAASQ 330
            |.::||:|:||...:.:.::  |.::|         .|...|.::      ..|||.  :.:...
Mouse   285 TVSDLLKHKFITQIEGKDVILQKQLMEFIDIHQCLGSTEKARHERIHTKKGNLNRSL--ISSLKD 347

  Fly   331 AKSLAT----QENGMQQHI 345
            ...|||    .||.:.:|:
Mouse   348 VDDLATLDVLDENTVSEHL 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 124/269 (46%)
S_TKc 42..293 CDD:214567 123/265 (46%)
Mst1_SARAH 608..655 CDD:288481
Myo3aNP_680779.3 PKc_like 10..295 CDD:304357 124/269 (46%)
S_TKc 29..295 CDD:214567 123/265 (46%)
MYSc 345..1060 CDD:214580 6/22 (27%)
MYSc_Myo3 360..1048 CDD:276830 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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