DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and stk25b

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_005171260.1 Gene:stk25b / 406600 ZFINID:ZDB-GENE-040426-2537 Length:430 Species:Danio rerio


Alignment Length:472 Identity:172/472 - (36%)
Similarity:243/472 - (51%) Gaps:113/472 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LKKLSEESLLQPPEKVFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLVPV---ESDLHEIIKEIS 87
            |:.:..::....||:.|....::|:||:|.|||.::..:..:||||::.:   |.::.:|.:||:
Zfish     4 LRDMQNQNSRLDPEEYFTKQERIGKGSFGEVYKGINNRTKEVVAIKIIDLEEAEDEIEDIQQEIT 68

  Fly    88 IMQQCDSPYVVRYYGSYFKQYDLWICMEYCGAGSVSDIMRLRKKTLTEDEIATILSDTLQGLVYL 152
            ::.|||||||.:|||||.|...|||.|||.|.||..|:  |:...|.|..|||||.:.|:||.||
Zfish    69 VLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDL--LKPGPLEETYIATILREILKGLEYL 131

  Fly   153 HLRRKIHRDIKAANILLNTEGYAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDCVA 217
            |..|||||||||||:||:.:|..||||||||||||||..||||.:|||||||||||::..||..|
Zfish   132 HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKA 196

  Fly   218 DIWSLGITALEMAEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWSTEFIDFVSKCLVKEPDDRA 282
            |||||||||:|:|:|:||..::||||.:|:||:..||:..  ..:|..|.:||..||.|:|..|.
Zfish   197 DIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNTPPTLE--GSYSKPFKEFVEACLNKDPRFRP 259

  Fly   283 TATELLEHEFI-RNAKHRSILKPMLEETCAIREQQRANRSFGGVLAASQAKSLATQENGMQQHIT 346
            ||.|||:|:|| |..|..|.|..:::.....:.:                               
Zfish   260 TAKELLKHKFITRYTKKTSYLTELIDRYRRWKSE------------------------------- 293

  Fly   347 DNAFMEDPGTLVPEKFGEYQQSSASDATMIAHAEQGVDEGTLGPGGLRNLSKAAAPAAASSAASP 411
                            |...:||:.|:.|.                               |..|
Zfish   294 ----------------GHGDESSSDDSDMY-------------------------------AVHP 311

  Fly   412 LD-------------MPAVDSGTMVELESNLGTMVINSDSDDSTTAKNNDDQKPRNR-----YRP 458
            ||             .|.|...:|.:|:..    ..|:||:.:.|.|    ::|:::     ..|
Zfish   312 LDGDGDDRDHCPVWTFPTVRPSSMNKLQKG----YTNTDSEAAETVK----RQPKSQCLSALVSP 368

  Fly   459 QFLEHFDRKNA-GDGRG 474
            .|.|..:::.| |.|.|
Zfish   369 IFRELKEKRRACGGGMG 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 139/257 (54%)
S_TKc 42..293 CDD:214567 137/253 (54%)
Mst1_SARAH 608..655 CDD:288481
stk25bXP_005171260.1 STKc_MST3_like 20..291 CDD:270786 143/274 (52%)
S_TKc 20..270 CDD:214567 137/253 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D967913at2759
OrthoFinder 1 1.000 - - FOG0000324
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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