DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and myo3a

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_991142.2 Gene:myo3a / 402814 ZFINID:ZDB-GENE-041026-4 Length:1775 Species:Danio rerio


Alignment Length:370 Identity:138/370 - (37%)
Similarity:210/370 - (56%) Gaps:39/370 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PEKVFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLV-PVESDLHEIIKEISIMQQ-CDSPYVVRY 100
            |...::|:..:|:|:||.|||..:|...|..|:|:: |:.....||..|.:|::. .|.|.||::
Zfish    17 PSDTWEIIETIGKGTYGKVYKVHNKVDGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKF 81

  Fly   101 YGSYFKQ-----YDLWICMEYCGAGSVSDI---MRLRKKTLTEDEIATILSDTLQGLVYLHLRRK 157
            :|.::|:     ..||:.:|.|..|||:|:   |..|...:.|..||.||.:.|.||.:||:.:.
Zfish    82 FGMFYKKDVKTGDQLWLVLELCNGGSVTDLAKGMLKRGDRMEEPIIAFILHEALMGLQHLHVNKT 146

  Fly   158 IHRDIKAANILLNTEGYAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIE-----EIGYDCVA 217
            ||||:|..||||.|:|..||.||||:.|||:|..:|||.:|||||||||||.     :..||...
Zfish   147 IHRDVKGNNILLTTDGGIKLVDFGVSAQLTNTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDERC 211

  Fly   218 DIWSLGITALEMAEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWSTEFIDFVSKCLVKEPDDRA 282
            |:|||||||:|:.:|.||..|:|||||:|.||:.|||:..:|:.||.:|.||:.|||:|:.:.|.
Zfish   212 DVWSLGITAIELGDGDPPLAELHPMRALFKIPRNPPPTLHQPELWSNDFNDFIRKCLIKDFELRP 276

  Fly   283 TATELLEHEFIRNAKHR-SILKPMLEETCAIREQQRANRSFGGVLAASQAKSLATQENGMQQ--- 343
            ...:||:|.||:....| ..|:..|.|...:.:|.       |::..:.....:.:::..:.   
Zfish   277 NVLDLLQHVFIKQIVGREKTLQKQLMELIDLNQQM-------GIIEKTSLLGKSDRDSDSRHERI 334

  Fly   344 HITDNAFMEDPGTLVPEKFGEYQQSSASDATMIAHAEQGVDEGTL 388
            |...|::|:.            |..:..||..:|..|. :||.|:
Zfish   335 HTKKNSYMKS------------QSQTCDDADDLATLEV-LDENTI 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 119/269 (44%)
S_TKc 42..293 CDD:214567 118/265 (45%)
Mst1_SARAH 608..655 CDD:288481
myo3aNP_991142.2 PKc_like 2..287 CDD:328722 119/269 (44%)
MYSc_Myo3 364..1091 CDD:276830 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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