DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and Stk24

DIOPT Version :10

Sequence 1:NP_611427.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_038949467.2 Gene:Stk24 / 361092 RGDID:1561742 Length:488 Species:Rattus norvegicus


Alignment Length:446 Identity:177/446 - (39%)
Similarity:247/446 - (55%) Gaps:70/446 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VDMKSPNISSSCSFFKLKKL---SEESLLQPPEKVFDIMYKLGEGSYGSVYKAVHKESSSIVAIK 71
            ::.|.|.:..:....|...|   .:|:|...||::|..:.|:|:||:|.|:|.:...:..:||||
  Rat    46 MESKVPRLGLALKRRKATPLHPGGKETLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIK 110

  Fly    72 LVPV---ESDLHEIIKEISIMQQCDSPYVVRYYGSYFKQYDLWICMEYCGAGSVSDIMRLRKKTL 133
            ::.:   |.::.:|.:||:::.|||||||.:|||||.|...|||.|||.|.||..|:  |....|
  Rat   111 IIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL--LEPGPL 173

  Fly   134 TEDEIATILSDTLQGLVYLHLRRKIHRDIKAANILLNTEGYAKLADFGVAGQLTDTMAKRNTVIG 198
            .|.:|||||.:.|:||.|||..:||||||||||:||:..|..||||||||||||||..||||.:|
  Rat   174 DEIQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 238

  Fly   199 TPFWMAPEVIEEIGYDCVADIWSLGITALEMAEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWS 263
            ||||||||||::..||..||||||||||:|:|:|:||:.|:|||:.:|:||:..||:..  ..:|
  Rat   239 TPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLE--GSYS 301

  Fly   264 TEFIDFVSKCLVKEPDDRATATELLEHEF-IRNAKHRSILKPML-----------------EETC 310
            ....:||..||.|||..|.||.|||:|:| |||||..|.|..::                 |::.
  Rat   302 RPLKEFVEACLNKEPSFRPTAKELLKHKFIIRNAKKTSYLTELIDRYKRWKAEQSHEDSSSEDSD 366

  Fly   311 AIREQQRANRSFGG----VLAASQAKSLATQENGMQQ--HITDNAFMEDP--------GTLVPEK 361
            ...:.|.:..|..|    .:.....|:|   |||..|  .:..|...:.|        .|::...
  Rat   367 VETDSQASGGSDSGDWIFTIREKDPKNL---ENGTLQPSDLERNKMKDFPKRPFSQCLSTIISPL 428

  Fly   362 FGEYQQSS-------------------ASDA------TMIAHAEQGVDEGTLGPGG 392
            |.|.::.|                   |.:|      ||:|...|.:...:|..||
  Rat   429 FAELKEKSQACGGNLGSIEELRGAIYLAEEACPGISDTMVAQLVQRLQRYSLSGGG 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_611427.1 STKc_MST1_2 38..293 CDD:132943 139/258 (54%)
SARAH_Hpo 606..661 CDD:439183
Stk24XP_038949467.2 None
Blue background indicates that the domain is not in the aligned region.

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