DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and tnika

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_005163444.1 Gene:tnika / 325042 ZFINID:ZDB-GENE-030131-3767 Length:1419 Species:Danio rerio


Alignment Length:638 Identity:195/638 - (30%)
Similarity:286/638 - (44%) Gaps:129/638 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SLLQPPEKVFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLVPVESDLHEIIK-EISIMQQCDSPY 96
            |.|:.|..:|:::..:|.|:||.|||..|.::..:.|||.:.|..:..|.|| ||:::::    |
Zfish    16 STLRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKCMDVTGEEEEEIKAEINMLKK----Y 76

  Fly    97 -----VVRYYGSYFKQY------DLWICMEYCGAGSVSDIMRLRK-KTLTEDEIATILSDTLQGL 149
                 :..|||::.|:.      .||:.||:||||||:|:::..| .:|.||..|.|..:.|:||
Zfish    77 SHHRNIATYYGAFIKKNPPGVDDQLWLVMEFCGAGSVTDLIKNTKGNSLKEDWTAYISREILRGL 141

  Fly   150 VYLHLRRKIHRDIKAANILLNTEGYAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----E 209
            .:||..:.||||||..|:||......||.||||:.||..|:::|||.||||:|||||||     .
Zfish   142 THLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVSRRNTFIGTPYWMAPEVIACDENP 206

  Fly   210 EIGYDCVADIWSLGITALEMAEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWSTEFIDFVSKCL 274
            :..||..:|:|||||||||||||.||..|:|||||:|:||:..||..:. .:|:..|..|:..||
Zfish   207 DATYDYKSDLWSLGITALEMAEGAPPLCELHPMRALFLIPRNAPPRLKS-KKWTKRFHSFIESCL 270

  Fly   275 VKEPDDRATATELLEHEFIRN-AKHRSI---LKPMLEETCAIR-EQQRANRSFGGVLAASQAKSL 334
            ||..:.|....:||:|.|||: |..|:|   ||..::.|...| |:......:.|    |:.:..
Zfish   271 VKNHNMRPGTDQLLKHPFIRDMANERTIRIQLKDHIDRTRKKRGERDETEYEYSG----SEEEEE 331

  Fly   335 ATQENGMQQHITDNAFMEDPG-TLVPEKFGEYQ--QSSASDATMIAHAEQGVDEGTLGPGGLRNL 396
            |..|.|     ..::.:..|| :.:...|...|  ....|||......||..:||          
Zfish   332 AMLEIG-----EPSSIINIPGESTLRRDFLRLQVANKERSDALRRQQLEQQQNEG---------- 381

  Fly   397 SKAAAPAAASSAASPLDMPAVDSGTMVELESNLGTMVINSDSDDSTTAKNNDDQKPRNRY----- 456
            .|....|              :....:|.:......:......:....|   .|:.|:||     
Zfish   382 HKHQLLA--------------ERQKRIEEQKEQRRRLEEQQRREREARK---QQEQRHRYEELRR 429

  Fly   457 --------RPQFLEHFDRKNAGDGRG---------DEKPIATEYSPAAAEQQQQQ---------- 494
                    |.|  |:..|:...:.|.         .|:.:..||.....|:|:|.          
Zfish   430 EEERRQAEREQ--EYIRRQLEEEQRQLEILQQQLLQEQALLLEYKRKQVEEQRQADRLQRQLQQE 492

  Fly   495 -------QQQQQQQQQDEQ--------HLASGAN--DLNNWEHNMEMQFQQISAINQYGLQQHQQ 542
                   ||||||||||.:        |.....|  |...|.       ::|....|..:|...:
Zfish   493 RAYLVSLQQQQQQQQQDSRPEEKKQLYHYKDAVNPSDKPAWA-------KKIHGPPQIKIQPSNR 550

  Fly   543 QQQVLMAYPLMNEQL----IALNNQPNLLLSNAAPMGQQGIPAAAPAQPPPAY 591
            :|...:.|.|.|..:    ..||...|..:.......:|.:.......|||.|
Zfish   551 KQSTPLYYKLDNLGIPIGRAILNPSINQSVMQPLKPQKQNLIQRQSISPPPQY 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 118/272 (43%)
S_TKc 42..293 CDD:214567 117/268 (44%)
Mst1_SARAH 608..655 CDD:288481
tnikaXP_005163444.1 PKc_like 18..313 CDD:304357 128/299 (43%)
S_TKc 25..289 CDD:214567 117/268 (44%)
CNH 1101..1399 CDD:214481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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