DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and Stk26

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_017457580.1 Gene:Stk26 / 317589 RGDID:1563568 Length:630 Species:Rattus norvegicus


Alignment Length:395 Identity:159/395 - (40%)
Similarity:231/395 - (58%) Gaps:49/395 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PEKVFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLVPV---ESDLHEIIKEISIMQQCDSPYVVR 99
            ||::|..:.::|:||:|.|:|.:...:..:||||::.:   |.::.:|.:||:::.||||.||.:
  Rat   234 PEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 298

  Fly   100 YYGSYFKQYDLWICMEYCGAGSVSDIMRLRKKTLTEDEIATILSDTLQGLVYLHLRRKIHRDIKA 164
            |||||.|...|||.|||.|.||..|:  ||.....|.:|||:|.:.|:||.|||..:||||||||
  Rat   299 YYGSYLKGSKLWIIMEYLGGGSALDL--LRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKA 361

  Fly   165 ANILLNTEGYAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDCVADIWSLGITALEM 229
            ||:||:.:|..||||||||||||||..||||.:|||||||||||::..||..||||||||||:|:
  Rat   362 ANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 426

  Fly   230 AEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWSTEFIDFVSKCLVKEPDDRATATELLEHEFI- 293
            |:|:||..::||||.:|:||:..||:.  ...::..|.:|:..||.|:|..|.||.|||:|:|| 
  Rat   427 AKGEPPNSDMHPMRVLFLIPKNNPPTL--VGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIV 489

  Fly   294 RNAKHRSILKPMLE----------------------ETCAIREQQRANRSFGGVLAASQAKSLAT 336
            :|:|..|.|..:::                      |:.:.........||..|......|.|  
  Rat   490 KNSKKTSYLTELIDRFKRWKAEGHSDEESDSEGSDSESSSRESNTHPEWSFTTVRKKPDPKKL-- 552

  Fly   337 QENGMQQHITDNAFMEDPGTLVPEKFGEYQQSSASDATMIAHAEQGVDEGTLGPGGLRNLSKAAA 401
             :||.:|.:...  :.....::...|.|.:|...::|:    ..|.::|          |.|:.|
  Rat   553 -QNGEEQDLVQT--LSCLSMIITPAFAELKQQDENNAS----RNQAIEE----------LEKSIA 600

  Fly   402 PAAAS 406
            .|.|:
  Rat   601 VAEAA 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 133/257 (52%)
S_TKc 42..293 CDD:214567 131/253 (52%)
Mst1_SARAH 608..655 CDD:288481
Stk26XP_017457580.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D967913at2759
OrthoFinder 1 1.000 - - FOG0000324
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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