DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and Nrk

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_006528613.1 Gene:Nrk / 27206 MGIID:1351326 Length:1512 Species:Mus musculus


Alignment Length:644 Identity:177/644 - (27%)
Similarity:296/644 - (45%) Gaps:128/644 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KKLSEESLLQPPEKVFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLVPVE--------------- 76
            |::::...|..|..:|.:...:|.|:||.::..:|:::.|:||:|::...               
Mouse    10 KEVTDLGQLPDPTGIFSLDKAIGLGTYGRIFLGIHEKTGSLVAVKVMSARKTPLPEIGRRVRVNK 74

  Fly    77 ---------SDLHEIIK-EISIMQQCD-SPYVVRYYGSYFK------QYDLWICMEYCGAGSVSD 124
                     ||..|.:: |::::::.. ...:|.:||::||      |:.||:.||.|.||||:|
Mouse    75 YQKSVGWRYSDEEEDLRTELNLLRKYSFHKNIVTFYGAFFKLNPPGHQHQLWMVMELCAAGSVTD 139

  Fly   125 IMRL-RKKTLTEDEIATILSDTLQGLVYLHLRRKIHRDIKAANILLNTEGYAKLADFGVAGQLTD 188
            ::|: |.::|.||.||.|..:.||||.:||..:.||||||..|:||..:...|:.||||:.|::.
Mouse   140 VVRMTRNQSLKEDWIAYICREILQGLAHLHAHQVIHRDIKGQNVLLTHDAEVKIVDFGVSAQVSR 204

  Fly   189 TMAKRNTVIGTPFWMAPEVIE-----EIGYDCVADIWSLGITALEMAEGKPPYGEIHPMRAIFMI 248
            |..:||:.||||:|||||||.     ...||..:|:||:||||:|||||.||..::.|:.|:.:|
Mouse   205 TNGRRNSFIGTPYWMAPEVIHCDEDPRCSYDYRSDVWSVGITAIEMAEGAPPLCKLQPLEALCVI 269

  Fly   249 PQKPPPSFREPDRWSTEFIDFVSKCLVKEPDDRATATELLEHEFIRNAKH-RSILKPMLEETCAI 312
            .::..|..:. ..||.:|.:|:..|::|....|.|:..:|.|.|:.:.|: |.:::.:.:....|
Mouse   270 LREAAPKVKS-SGWSRKFQNFMENCMIKNFLFRPTSGNMLLHPFVHDIKNERRVVESLTKHLTGI 333

  Fly   313 ---RE---------------QQRANRSFGG---------VLAASQAKSLAT--QENGMQQHITDN 348
               ||               :|...|.|.|         |..:|:.:.|..  .|....:.:.| 
Mouse   334 IQKREKKGIPVAFEGEEAAKEQYITRRFRGPSCTPELLRVPTSSRCRPLRVLHGEPPQPRWLPD- 397

  Fly   349 AFMEDPGTLVPEKFGEYQQ-SSASDATMIAHAEQGVDEGTLGPGG------LRNLSKAAAPAAAS 406
              .|||      :..|.|| ..|:...|..|::....:  |.|..      ||..::...|....
Mouse   398 --QEDP------QDQELQQLQKAAGVFMPLHSQDNTSK--LFPKQVEVAPYLRGAAQVVMPVLVQ 452

  Fly   407 SAASPLDMPAVDSGTMVELESNLGTMVINSDSDDSTTAKNNDDQ-KPRNRYRPQFLEHFDRKNAG 470
            ..|.|....|......:..:.|..|    |....:..|:....| :.....:|:.|:....:..|
Mouse   453 VEAPPQVSKAAQMLKSLPTQDNKAT----SPEVQAPVAEGQQAQHEALETEQPKDLDQVPEEFQG 513

  Fly   471 DGRGDEKPIATEYSPAAAEQQQ-------QQQQQQQQQQQDEQHLASGANDLNNWEHNMEMQFQQ 528
            ..|..|:|...:    ||||||       |..::.::.:|.|..           |..:|....:
Mouse   514 QDRAPEQPRQGQ----AAEQQQIHNPVPEQPPEEDREPEQAEVQ-----------EEAVEPPQAE 563

  Fly   529 ISAINQYGLQQHQQQQQVLMAYPLMNEQ---LIALNNQPNLLLSNAAPMGQQG--IPAA 582
            |.......:|.|   .|||:  ||:::.   |:.|:....||:    |:|:|.  :|.|
Mouse   564 IEDKEPEVVQVH---AQVLL--PLLSQNRHVLLPLHLDRQLLI----PVGEQNEEVPRA 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 104/292 (36%)
S_TKc 42..293 CDD:214567 103/288 (36%)
Mst1_SARAH 608..655 CDD:288481
NrkXP_006528613.1 PKc_like 14..313 CDD:389743 105/299 (35%)
rne <430..578 CDD:236766 32/169 (19%)
CNH 1143..1479 CDD:382970
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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