DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and Pak5

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_006499571.1 Gene:Pak5 / 241656 MGIID:1920334 Length:736 Species:Mus musculus


Alignment Length:277 Identity:105/277 - (37%)
Similarity:159/277 - (57%) Gaps:12/277 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PEKVFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLVPVESDLHE------IIKEISIMQQCDSPY 96
            |.:..|...|:||||.|.|..|..|.:...||:|    :.||.:      :..|:.||:......
Mouse   462 PREYLDNFIKIGEGSTGIVCIATEKHTGKQVAVK----KMDLRKQQRRELLFNEVVIMRDYHHDN 522

  Fly    97 VVRYYGSYFKQYDLWICMEYCGAGSVSDIMRLRKKTLTEDEIATILSDTLQGLVYLHLRRKIHRD 161
            ||..|.||....:||:.||:...|:::||:...:  :.|::|||:....|:.|.|||.:..||||
Mouse   523 VVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLKALSYLHNQGVIHRD 585

  Fly   162 IKAANILLNTEGYAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDCVADIWSLGITA 226
            ||:.:|||.::|..||:|||...|::..:.||.:::|||:|||||||..:.|....|||||||..
Mouse   586 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMV 650

  Fly   227 LEMAEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWSTEFIDFVSKCLVKEPDDRATATELLEHE 291
            :||.:|:|||....|::|:..|....||..::..:.|:....|:...||:||..||||.|||.|.
Mouse   651 IEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSMLRGFLDLMLVREPSQRATAQELLGHP 715

  Fly   292 FIRNAKHRSILKPMLEE 308
            |::.|...|.:.|::.:
Mouse   716 FLKLAGPPSCIVPLMRQ 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 101/260 (39%)
S_TKc 42..293 CDD:214567 100/256 (39%)
Mst1_SARAH 608..655 CDD:288481
Pak5XP_006499571.1 CRIB_PAK_like 26..72 CDD:238526
STKc_PAK5 443..734 CDD:132989 105/277 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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