DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and gck-3

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_507517.2 Gene:gck-3 / 190400 WormBaseID:WBGene00013355 Length:596 Species:Caenorhabditis elegans


Alignment Length:447 Identity:141/447 - (31%)
Similarity:211/447 - (47%) Gaps:71/447 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PNISSSCSFFKLKKLSEESLLQPPEK------VFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLV 73
            |.:||..:.......:..:.|.|.::      .:.:...:|.|:..:|:.|.....:..||||.:
 Worm    75 PQVSSPIAAAAAASAALVAQLNPADRWPTEPSAYKLDESIGVGATATVFTAYCLPRNEKVAIKCI 139

  Fly    74 PVE---SDLHEIIKEISIMQQCDSPYVVRYYGSYFKQYDLWICMEYCGAGSVSDIMRLRKK---- 131
            .:|   :.:.|:..||..|.||:.|.||.||.|:..|.:||:.|.....||:.||::.:.|    
 Worm   140 NLEKCQTSVDELSHEIQAMSQCNHPNVVSYYTSFIAQEELWVVMRLLNCGSMLDILKRKVKAIGK 204

  Fly   132 ------TLTEDEIATILSDTLQGLVYLHLRRKIHRDIKAANILLNTEGYAKLADFGVAGQLTDT- 189
                  .|.|..|||:|.:.|:||.|.||..:|||||||.||||..:|..::|||||:|.|..: 
 Worm   205 EQAQFGVLDEVSIATVLREVLKGLEYFHLNGQIHRDIKAGNILLADDGTIQIADFGVSGWLASSG 269

  Fly   190 -----MAKRNTVIGTPFWMAPEVIEEI-GYDCVADIWSLGITALEMAEGKPPYGEIHPMRAIFMI 248
                 ...|:|.:|||.||||||:|:: |||..||||||||.|:|:|.|..||.:..||:.:.:.
 Worm   270 GDLSRQKVRHTFVGTPCWMAPEVMEQVQGYDFKADIWSLGILAIELATGTAPYHKYPPMKVLMLT 334

  Fly   249 PQKPPPSF----REPDRWST---EFIDFVSKCLVKEPDDRATATELLEHEFIRNAKHRSILKPML 306
            .|..||:.    ...|::..   .|...:..||.|:|..|.||:|||::.|.:..|.:..|...|
 Worm   335 LQNDPPTLETNAERKDQYKAYGKSFKTLIRDCLQKDPAKRPTASELLKYSFFKKGKDKKYLVHTL 399

  Fly   307 EETCAIREQQRANRSFGGVLAASQAKSLATQ------------ENGMQQHITDNAFMEDPGTLVP 359
            .|          |.:...|:|...:|.:|:.            |....|...|::.:||...   
 Worm   400 IE----------NLASVPVVAHHSSKKVASGKLRKDAHGNWEFEYDSPQESDDDSDLEDEER--- 451

  Fly   360 EKFGEYQQSSASDATMIAHAEQGVDEGTLG-PGGLRNLSKAAAPAAASSAASPLDMP 415
            ||..:...:|||.|            |..| .||....:.:.||:|.....:....|
 Worm   452 EKKKKKASASASGA------------GAAGAAGGATGGAASGAPSAQEGGGATTPCP 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 107/287 (37%)
S_TKc 42..293 CDD:214567 107/277 (39%)
Mst1_SARAH 608..655 CDD:288481
gck-3NP_507517.2 STKc_OSR1_SPAK 106..386 CDD:270787 107/279 (38%)
S_TKc 108..386 CDD:214567 107/277 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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