DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and mig-15

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001024973.1 Gene:mig-15 / 181248 WormBaseID:WBGene00003247 Length:1096 Species:Caenorhabditis elegans


Alignment Length:630 Identity:184/630 - (29%)
Similarity:304/630 - (48%) Gaps:108/630 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LQPPEKVFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLVPVESDLHEIIK-EISIMQQ-CDSPYV 97
            |:.|..:|:::..:|.|:||.|||..|.:::.:.|||::.:..|..:.|| ||::::: .....|
 Worm    14 LRDPAGIFELIEVVGNGTYGQVYKGRHVKTAQLAAIKIMNINEDEEDEIKLEINMLKKHSHHRNV 78

  Fly    98 VRYYGSYFKQY--------DLWICMEYCGAGSVSDIMRLRK-KTLTEDEIATILSDTLQGLVYLH 153
            ..|||::.|:.        .||:.||:||:||::|:::..| .:|.|:.||.|..:.|:||.:||
 Worm    79 ATYYGAFIKKLPSSTGKHDQLWLVMEFCGSGSITDLVKNTKGGSLKEEWIAYICREILRGLYHLH 143

  Fly   154 LRRKIHRDIKAANILLNTEGYAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----EEIGY 213
            ..:.||||||..|:||......||.||||:.||..|:.:|||.||||:|||||||     .|..|
 Worm   144 QSKVIHRDIKGQNVLLTDSAEVKLVDFGVSAQLDKTVGRRNTFIGTPYWMAPEVIACDESPEATY 208

  Fly   214 DCVADIWSLGITALEMAEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWSTEFIDFVSKCLVKEP 278
            |..:|:|||||||||||||.||..::|||||:|:||:.|||..:...:|:.:|..|:...|||:.
 Worm   209 DSRSDLWSLGITALEMAEGHPPLCDMHPMRALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKDY 273

  Fly   279 DDRATATELLEHEFIRNAKHRSILKPMLEETCAIREQQR-----ANRSFGGVLAASQAKSLATQE 338
            ..|.....||.|.||:...|...::..::|  .|...:|     |:..:.|    |:....:...
 Worm   274 HQRPYTGALLRHPFIKEQPHEQTIRHSIKE--HIDRNRRVKKDDADYEYSG----SEDDEPSPNN 332

  Fly   339 NGMQQHITDNAFMEDPGTLVP------EKFGEYQQSSASDATMIAHAEQGVDEGTLGPGGLRNLS 397
            .|....|.|::   :..:::|      :.|.:.|:||.      ..||.|..:       ||.|.
 Worm   333 RGPSMGIRDDS---ESSSMIPMDNTLRKGFQKLQESSR------GFAEPGAQQ-------LRRLP 381

  Fly   398 KAAAPAAASSAASPLDMPAVDSGTMVELESNLGTMVINSDSDDSTTAKNNDDQKPRNRYRPQFLE 462
            :..|||......|....|..:| :.|:|.           :..|..|.:.....|.:|.||  :.
 Worm   382 QQPAPAPFQYQQSRYVEPRRES-SEVKLR-----------AVSSRGAADGPRHSPASRPRP--VS 432

  Fly   463 HFDRKNAGDGRGDEKPIATEYSPAAAEQQQQQQQQQQQQQQDEQ-HLASGANDLNNWEHNMEMQF 526
            |..|...     ...|.|...:..|..:::::.:::::::::.| |.|              |..
 Worm   433 HHQRSPQ-----QSHPAAPHLADLANYEKRRRSEREERRERERQAHHA--------------MPI 478

  Fly   527 QQISAINQYGLQQHQQQQQVLMAYPLMNEQLIALNNQP---NLLLSNAAPMG--------QQGIP 580
            .::||    .:...||.::       |:|.|:..:.:|   ::|.|..:.||        ::.:.
 Worm   479 ARVSA----SVPAPQQSRK-------MSEPLLITHVKPEDLDVLASELSKMGGHHNGRSREESMS 532

  Fly   581 AAAPAQPPPAYQNQHMHTQSHAYVEGEFEFLKFLTFDDLNQRLCN 625
            ...||.||   :...:.:.:.....||.:......:|||...:.|
 Worm   533 PPPPAPPP---REASISSITDTIDVGELDNGADAEWDDLKDIMMN 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 115/270 (43%)
S_TKc 42..293 CDD:214567 114/266 (43%)
Mst1_SARAH 608..655 CDD:288481 4/18 (22%)
mig-15NP_001024973.1 STKc_myosinIII_N_like 14..288 CDD:270785 116/273 (42%)
S_TKc 21..288 CDD:214567 114/266 (43%)
CNH 773..1076 CDD:214481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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