DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and cst-1

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001024575.2 Gene:cst-1 / 180708 WormBaseID:WBGene00017472 Length:497 Species:Caenorhabditis elegans


Alignment Length:632 Identity:265/632 - (41%)
Similarity:346/632 - (54%) Gaps:155/632 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KLSEESLLQPPEKVFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLVPVESDLHEIIKEISIMQQC 92
            ||...:|.:|||:||||:.||||||||||:||:|:||..::|||.|||::||.||||||||||||
 Worm    21 KLDSSALNKPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQC 85

  Fly    93 DSPYVVRYYGSYFKQYDLWICMEYCGAGSVSDIMRLRKKTLTEDEIATILSDTLQGLVYLHLRRK 157
            .|.|||:|||||||..||||.||||||||:|||||.|:|.|:|.||:.:|.|||:||.|||..:|
 Worm    86 KSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKK 150

  Fly   158 IHRDIKAANILLNTEGYAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDCVADIWSL 222
            |||||||.||||||:|.||||||||||||||||||||||||||||||||||||||||..||||||
 Worm   151 IHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSL 215

  Fly   223 GITALEMAEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWSTEFIDFVSKCLVKEPDDRATATEL 287
            ||||:|||||:|||.:|||||||||||.||||:|::|:.||:||.||:..||:|:|::|.||..|
 Worm   216 GITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRL 280

  Fly   288 LEHEFIRNAKHRSILKPMLEETCAIREQQRANRSFGGVLAASQAKSLATQENGMQQHITDNAFME 352
            .||.||:||....|::.|:::                    :|.|::..|               
 Worm   281 CEHTFIKNAPGCDIMQLMIQD--------------------AQEKAILGQ--------------- 310

  Fly   353 DPGTLVPEKFGEYQQSSASDATMIAHAEQGVDEGTLGPGGLRNLSKAAAPAAASSAASPLDMPAV 417
                                                            ||.||||.         
 Worm   311 ------------------------------------------------APMAASSG--------- 318

  Fly   418 DSGTMVELESNLGTMVINSDSDDSTTAKNNDDQKPRNRYRPQFLEHFDRKNAGDGRGDEKPIATE 482
            :..|:  |...:.||:   |..:||..::.|:.......|.| :|..       ..|.|.| .:.
 Worm   319 NDATL--LSEGMSTMI---DGGESTLVQHKDNYVTAQSLRSQ-MESL-------RIGGEIP-KSA 369

  Fly   483 YSPAAAEQQQQQQQQQQQQQQDEQHLASGANDLNNWEHNMEMQFQQISAINQYGLQQHQQQQQVL 547
            |.|.::      :.....:.|...|.||.::...|      ..|.|......:.|...:...:. 
 Worm   370 YIPGSS------KNGNSPRVQPPGHTASASDPSKN------QPFAQDGTGPNFQLGTSESSYKD- 421

  Fly   548 MAYPLMNEQLIALNNQPNLLLSNAAPMGQQGIPAAAPAQPPPAYQNQHMHTQSHAYVEGEFEFLK 612
            .:|.:||.:                                ..|:|:.    ..|.|:|:||||:
 Worm   422 ASYNMMNTE--------------------------------AEYENRF----QRAVVDGDFEFLR 450

  Fly   613 FLTFDDLNQRLCNIDHEMELEIEQLNKKYNAKRQPIVDAMNAKRKRQ 659
            .:|.|:|.:|..::|.|||.||.:|.::|..|||||:|.:..|::.|
 Worm   451 NITLDELIRRKESLDSEMEEEIRELQRRYKTKRQPILDVIEIKKRLQ 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 190/254 (75%)
S_TKc 42..293 CDD:214567 187/250 (75%)
Mst1_SARAH 608..655 CDD:288481 22/46 (48%)
cst-1NP_001024575.2 STKc_MST1_2 31..286 CDD:132943 190/254 (75%)
S_TKc 35..286 CDD:214567 187/250 (75%)
Mst1_SARAH 446..493 CDD:288481 22/46 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160739
Domainoid 1 1.000 396 1.000 Domainoid score I380
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48420
Inparanoid 1 1.050 486 1.000 Inparanoid score I790
Isobase 1 0.950 - 0 Normalized mean entropy S1182
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D247842at33208
OrthoFinder 1 1.000 - - FOG0000324
OrthoInspector 1 1.000 - - otm14236
orthoMCL 1 0.900 - - OOG6_102280
Panther 1 1.100 - - LDO PTHR48015
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4601
SonicParanoid 1 1.000 - - X1715
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.880

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