DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and dop-6

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001359889.1 Gene:dop-6 / 180706 WormBaseID:WBGene00016037 Length:692 Species:Caenorhabditis elegans


Alignment Length:139 Identity:27/139 - (19%)
Similarity:48/139 - (34%) Gaps:29/139 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 LSKAAAPAAASSAASPLDMPAVDSGTMVELESNLGTMVINSDSDDSTTAKNNDDQKPR------- 453
            |.|.....||..|:|..|.......|::|     .....:|.|.::||.:.:.|:.|.       
 Worm   262 LLKKIEETAAEHASSLNDSEREQLQTILE-----AVHPSSSGSQENTTIEEDPDRPPSVLLEAVT 321

  Fly   454 ------------NRYRPQFLEHFDRK-----NAGDGRGDEKPIATEYSPAAAEQQQQQQQQQQQQ 501
                        ...||.:.::..|:     |:...||..|.::...|.......|.|..::...
 Worm   322 LKCEIDTSGPILELPRPTYTKNMSRRFSDAVNSISSRGRMKSVSFGTSRKRRHSHQPQGNREVVT 386

  Fly   502 QQDEQHLAS 510
            .::.:.|.|
 Worm   387 SEESKKLHS 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943
S_TKc 42..293 CDD:214567
Mst1_SARAH 608..655 CDD:288481
dop-6NP_001359889.1 7tmA_amine_R-like 24..>217 CDD:320098
TM helix 1 25..49 CDD:320098
TM helix 2 58..80 CDD:320098
TM helix 3 97..119 CDD:320098
TM helix 4 142..158 CDD:320098
TM helix 5 181..204 CDD:320098
7tm_GPCRs <464..542 CDD:391938
TM helix 6 466..496 CDD:341315
TM helix 7 513..535 CDD:341315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0574
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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