DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpo and gck-1

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_505310.2 Gene:gck-1 / 179274 WormBaseID:WBGene00001526 Length:803 Species:Caenorhabditis elegans


Alignment Length:635 Identity:205/635 - (32%)
Similarity:286/635 - (45%) Gaps:166/635 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PEVTSV-VDMKSPNIS--SSCSFFKLKKLSEESLLQPPEKVFDIMYKLGEGSYGSVYKAVHKESS 65
            |...|| :::.||.:|  ......|:.|..|::....||.:|....::|.||:|.|||.:...:.
 Worm   143 PSSLSVDLNVMSPEVSPPKPAERRKVVKPIEDNSKLDPEVIFTKQERIGRGSFGEVYKGIDNRTG 207

  Fly    66 SIVAIKLVPV---ESDLHEIIKEISIMQQCDSPYVVRYYGSYFKQYDLWICMEYCGAGSVSDIMR 127
            .:||||::.:   |.::.:|.:||.::.||||.||.:|:||:.|...|||.|||.|.||..|:.:
 Worm   208 RVVAIKIIDLEQAEDEIEDIQQEIQVLSQCDSQYVTKYFGSFLKGSKLWIIMEYLGGGSALDLTK 272

  Fly   128 LRKKTLTEDEIATILSDTLQGLVYLHLRRKIHRDIKAANILLNTEGYAKLADFGVAGQLTDTMAK 192
            ..|  |.|..||.||.:.|:||.|||..|||||||||||:|::..|..|:||||||||||:|:.|
 Worm   273 SGK--LDESHIAVILREILKGLEYLHSERKIHRDIKAANVLVSEHGDVKVADFGVAGQLTETVKK 335

  Fly   193 RNTVIGTPFWMAPEVIEEIGYDCVADIWSLGITALEMAEGKPPYGEIHPMRAIFMIPQKPPPSFR 257
            |.|.:|:|||||||:|::..||..||||||||||:|:|.|:||:.::||||.:|:||:.|||.. 
 Worm   336 RITFVGSPFWMAPELIKQSSYDYKADIWSLGITAIELANGEPPHSDLHPMRVLFLIPKNPPPVL- 399

  Fly   258 EPDRWSTEFIDFVSKCLVKEPDDRATATELLEHEFIRNAKHRSILKPMLEETCAIREQQRANRSF 322
            :..:||..|.:||..||.|:|::|.:|:.||:|:||:.||..|||..::|.....|.:.      
 Worm   400 QGSQWSKPFKEFVEMCLNKDPENRPSASTLLKHQFIKRAKKNSILVDLIERAAEYRLRT------ 458

  Fly   323 GGVLAASQAKSLATQENGMQQHITDNAFMEDPGTLVPEKFGEYQQSSASDATMIAHAEQGVDEGT 387
             ||                                          ||.||          :||.:
 Worm   459 -GV------------------------------------------SSDSD----------LDEDS 470

  Fly   388 LGPGGLRNLSKAAAPAAASSAASPLDMPAVDSGTMVELESNLGTMVINSDSDDSTTAKNNDDQKP 452
            .|.||                .|..|.|.| .|..|            |..||.|..:..|  :|
 Worm   471 DGGGG----------------TSKWDYPTV-RGPRV------------SADDDGTVRQRTD--RP 504

  Fly   453 RNRYRPQFLEHFDRKNAGDGRGDEKPIATEYSPAAAEQQQQQQQQQQQQQQDEQHLASGANDLNN 517
            |        ...||::.....|......:....|.||       |.:..........||.|    
 Worm   505 R--------AQVDRRSPSGSPGGTIVRGSPQVAAVAE-------QLRNSSVGSSGYGSGGN---- 550

  Fly   518 WEHNMEMQFQQISAINQYGL----QQHQQQQ----QVLMAYPLMNEQLIALNNQPNLLL----SN 570
                        ||.:||..    |.|....    .:.:..|         |..|...|    |.
 Worm   551 ------------SASSQYATSSLPQSHTASSGGATTITLGSP---------NGSPTSSLARTQSM 594

  Fly   571 AAPMGQQGIPAAA--------------PAQPPPAYQNQHMHTQSHAYVEG 606
            .:|.||:...|.:              .:|..|:..||| .|.|...|:|
 Worm   595 VSPSGQRSGSAQSWELERGNRPMSERVSSQVSPSKYNQH-RTSSSNGVQG 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 129/257 (50%)
S_TKc 42..293 CDD:214567 127/253 (50%)
Mst1_SARAH 608..655 CDD:288481
gck-1NP_505310.2 STKc_MST3_like 183..455 CDD:270786 135/274 (49%)
S_TKc 184..435 CDD:214567 127/253 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D247842at33208
OrthoFinder 1 1.000 - - FOG0000324
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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