DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hpo and nrk

DIOPT Version :9

Sequence 1:NP_001261092.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_031747384.1 Gene:nrk / 100486469 XenbaseID:XB-GENE-952099 Length:1237 Species:Xenopus tropicalis


Alignment Length:624 Identity:186/624 - (29%)
Similarity:286/624 - (45%) Gaps:148/624 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MKSPNISSSCSFFKLKKLSEESLLQPPEKVFDIMYKLGEGSYGSVYKAVHKESSSIVAIKLVPVE 76
            |.|...:.|..:..|..|.|      |..:|:::..:|.|:||.|||..|.::..:.|||::.|.
 Frog     1 MASMITAKSLDYIDLASLRE------PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMNVT 59

  Fly    77 SDLHEIIK-EISIMQQCDSPY-----VVRYYGSYFK-----QYD-LWICMEYCGAGSVSDIMRLR 129
            .:..|.|| ||:::::    |     :..|||::.:     |.| ||:.|||||||||:|:::..
 Frog    60 EEEEEEIKLEINMLKK----YSHHRNIATYYGAFVRKGLAGQDDQLWLVMEYCGAGSVTDLVKKT 120

  Fly   130 K-KTLTEDEIATILSDTLQGLVYLHLRRKIHRDIKAANILLNTEGYAKLADFGVAGQLTDTMAKR 193
            | ....||.||.|..:.|:||.:||....||||||..|:||......||.||||:.||..|:.:|
 Frog   121 KGNCFKEDWIAYICREVLRGLAHLHAHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTIGRR 185

  Fly   194 NTVIGTPFWMAPEVI-----EEIGYDCVADIWSLGITALEMAEGKPPYGEIHPMRAIFMIPQKPP 253
            ||.||||:|||||||     .:..||..:|:|||||||:|||||.||..::|||||:|:||:.||
 Frog   186 NTFIGTPYWMAPEVIACDENPDSTYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP 250

  Fly   254 PSFREPDRWSTEFIDFVSKCLVKEPDDRATATELLEHEFIRNAKHRSILKPMLEETCAIREQQRA 318
            |..:. .:||.:.|:||..||||....|.:...||:|.|:|:.::...::.||::     ...||
 Frog   251 PKLKS-RKWSKKCINFVDSCLVKNYSHRPSTDTLLKHAFVRDLQNERHIRIMLKD-----HLDRA 309

  Fly   319 NRSFGGVLAASQAKSLATQENGMQQHITDNAFMEDPGTLVPEKFGEYQQSSASDATMIAHAEQGV 383
            .:..|           ...|||.                      ||..|...|      .|...
 Frog   310 RKKKG-----------EKDENGY----------------------EYSGSEEED------DELNE 335

  Fly   384 DEGTLGPGGLRNLSKAAAPAAASSAASPLDMPAVDSGTMVELESNLGTMVINSDSDDSTTAKNND 448
            |||.  |..:.||                  |.         ||.|....:....::    ||..
 Frog   336 DEGE--PSSIVNL------------------PG---------ESTLRREFLRLQQEN----KNRS 367

  Fly   449 DQ-----------KPRNRYRPQF---------LEHFDRKNAGDGRGDEKPI--ATEYSPAAAEQQ 491
            |.           |.:.:|:.|.         .:...||...|.:..|:.:  ..||.|...|.:
 Frog   368 DPPRPQQLQQQQLKDQEKYKMQLQAERQKRIEQQKEQRKKLEDYQRRERDLQKCQEYQPKWPEMK 432

  Fly   492 QQQQQQQQQQQ-----QDEQHLASGANDLN------NWEHNMEMQFQQISAINQYG--LQQHQQQ 543
            :..:.:.::::     :.::.|.:.|.|.|      |.:|.::...::.:.::|:|  .::.|.|
 Frog   433 EDAKSEGKKREDRKCAEQDRCLFNDAYDKNDRKQHENLKHKVDYGEKKKTEVSQHGGRPEESQTQ 497

  Fly   544 QQVLMAYPLMNEQLIAL-------NNQPNLLLSNAAPMG 575
            ::.....|....||:.|       |.:|...:||..|:|
 Frog   498 KKFHRTLPKDQTQLLFLQHDHKEKNLEPQRNISNHIPVG 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpoNP_001261092.1 STKc_MST1_2 38..293 CDD:132943 121/272 (44%)
S_TKc 42..293 CDD:214567 120/268 (45%)
Mst1_SARAH 608..655 CDD:288481
nrkXP_031747384.1 STKc_MAP4K4_6_N 8..289 CDD:270806 125/291 (43%)
CNH 919..1215 CDD:214481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.