DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rep and Gdi

DIOPT Version :9

Sequence 1:NP_477420.1 Gene:Rep / 37246 FlyBaseID:FBgn0026378 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001245953.1 Gene:Gdi / 34264 FlyBaseID:FBgn0004868 Length:443 Species:Drosophila melanogaster


Alignment Length:460 Identity:120/460 - (26%)
Similarity:194/460 - (42%) Gaps:108/460 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFS-MDALCARLDQEVEPHSALR 70
            |::|.:|:|||..|..::...|..||.|||:|.|:|||...:|.: ::.|..|            
  Fly     3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFQR------------ 55

  Fly    71 NARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKSNICRYAEFRAV 135
                  :.:|...|.          ..:.|.:::||.|:.|.|.|:||:|||.:.:.||.||:::
  Fly    56 ------YGLEPPGER----------FGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSI 104

  Fly   136 DHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACNDYGED-----------KCNEDS 189
            :...:...|:|..||..:.:...:..:.:.|||....||....|:.||           |.|...
  Fly   105 EGSYVYKGGKIAKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFREDDPKTWKDFDPTKANMQG 169

  Fly   190 L-----------EFRGRTFL-----EYLQAQRVTEKISSCVMQAIAMCGPSTSFEEGMQRTQRFL 238
            |           :|.|....     |||....|..                      ::|.:.:.
  Fly   170 LYDKFGLDKNTQDFTGHALALFRDDEYLNEPAVNT----------------------IRRIKLYS 212

  Fly   239 GSLGRYGNTPFLFPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDIALDSNSNEFLLSSAGKTLRA 303
            .||.|||.:|:|:||||.|||||.|.||.|:|||.|.|.:.:|:|.|........:.|..:..:.
  Fly   213 DSLARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDKPIDEIVLGEGGKVVGVRSGEEVAKC 277

  Fly   304 KNVVSAPGYTPVSKGIELKPHISRGLFISSSPLGNEELNKGGGGVNLLRLLDNEGGREA----FL 364
            |.|...|.|.|  :.:..:..:.|.:.|...|:.:   .|.|....:: :...:.||::    .|
  Fly   278 KQVYCDPSYVP--EKVRKRGKVIRCICILDHPVAS---TKDGLSTQII-IPQKQVGRKSDIYVSL 336

  Fly   365 IQLSHYTGACPEGLYIFHLTT------PALSEDPASDLAIFTSQLF-----------DQSDAQII 412
            :..:|...|  :|.::..::|      |.:...|..||....:|.|           |.|::||.
  Fly   337 VSSTHQVAA--KGWFVGMVSTTVETENPEVEIKPGLDLLEPIAQKFVTISDYLEPIDDGSESQIF 399

  Fly   413 FS-SY 416
            .| ||
  Fly   400 ISESY 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RepNP_477420.1 NADB_Rossmann 4..397 CDD:304358 110/427 (26%)
GdiNP_001245953.1 GDI 1..435 CDD:279353 120/460 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454846
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5044
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11787
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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