Protein Alignment TBCB and Clip1

DIOPT Version :9

• Sequence 1: NP_611425.1
• Gene: TBCB / 37244
• FlyBaseID: FBgn0034451
• Length: 244
• Species: Drosophila melanogaster
• Sequence 2: XP_038945655.1
• Gene: Clip1 / 65201
• RGDID: 67404
• Length: 2202
• Species: Rattus norvegicus
• Alignment Length: 110
• Identity: 39/110 - (35%)
• Similarity: 53/110 - (48%)
• Gaps: 9/110 - (8%)

  Fly   125 KINRMGKYNDEEMQQAEEKKRLQAEEIQKRAELCVLGGRCEVTVPGNPTRRGTIRYNGPLEGKSG 189
            :|:.:.|...|.:....|     |..::|......:|.|  |.|.|  |:.|.:|:.|..:...|
  Rat   183 QISNLTKTASESISNLSE-----AGSVKKGERELKIGDR--VLVGG--TKAGVVRFLGETDFAKG 238

  Fly   190 HFIGVEYDEPLGKNNGSFGGKAYFTCAPNYGGFVSPLSVTVGDFP 234
            .:.|||.|||||||:|:..|..||.|.|.||.|.....||...||
  Rat   239 EWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFP 283

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBCB	NP_611425.1	Alp11_N	12..95	CDD:176384
		CAP_GLY	161..225	CDD:279625	29/63 (46%)
Clip1	XP_038945655.1	CAP_GLY	60..124	CDD:396049
		CAP_GLY	213..277	CDD:396049	29/67 (43%)
		SbcC	<344..802	CDD:223496
		Smc	594..1345	CDD:224117
		SMC_prok_B	1047..1919	CDD:274008
		pneumo_PspA	1838..>2141	CDD:411490
		CLIP1_ZNF	2180..2196	CDD:406934

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910