Protein Alignment Tbcb and Clip3

DIOPT Version :10

• Sequence 1: NP_611425.1
• Gene: Tbcb / 37244
• FlyBaseID: FBgn0034451
• Length: 244
• Species: Drosophila melanogaster
• Sequence 2: NP_001100971.1
• Gene: Clip3 / 308493
• RGDID: 1306245
• Length: 547
• Species: Rattus norvegicus
• Alignment Length: 145
• Identity: 50/145 - (34%)
• Similarity: 65/145 - (44%)
• Gaps: 40/145 - (27%)

  Fly   127 NRMGKYNDE------EMQQAEEKKRLQAEEIQKRAE-----LCVLGGRCEVT------VPGN--- 171
            ||.|:...|      :|...:.:..|.|:|::...|     .|.|.   :||      ||||
  Rat   228 NRKGQVPAEVVPDPMDMSLDKAEAALVAKELRTLLEEAVPLSCTLP---KVTLPNYDNVPGNLML 289

  Fly   172 --------------PTRRGTIRYNGPLEGKSGHFIGVEYDEPLGKNNGSFGGKAYFTCAPNYGGF 222
                          ..:.||:|:.|..|..||.::|||.|||.|||:||.||..||.|.|..|.|
  Rat   290 SALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLF 354

  Fly   223 --VSPLSVTVGDFPP 235
              ||.:|..| |.||
  Rat   355 ASVSKVSKAV-DAPP 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tbcb	NP_611425.1	Ubiquitin_2	13..93	CDD:405277
		CAP_GLY	160..225	CDD:460154	34/89 (38%)
Clip3	NP_001100971.1	ANKYR	<101..>235	CDD:440430	3/6 (50%)
		ANK repeat	120..157	CDD:293786
		ANK repeat	159..190	CDD:293786
		ANK repeat	198..228	CDD:293786	50/145 (34%)
		CAP_GLY	296..360	CDD:460154	28/63 (44%)
		CAP_GLY	418..482	CDD:460154