DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbcb and clip2

DIOPT Version :10

Sequence 1:NP_611425.1 Gene:Tbcb / 37244 FlyBaseID:FBgn0034451 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_017947094.2 Gene:clip2 / 100487868 XenbaseID:XB-GENE-1010626 Length:1036 Species:Xenopus tropicalis


Alignment Length:77 Identity:33/77 - (42%)
Similarity:45/77 - (58%) Gaps:8/77 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LGGRCEVTVPGNPTRRGTIRYNGPLEGKSGHFIGVEYDEPLGKNNGSFGGKAYFTCAPNYGGFVS 224
            :|.|  |.|.|  |:.|.:||.|..:...|.:.|||.|||||||:|:..|..||.|.|.:|.| :
 Frog   212 IGDR--VLVGG--TKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLF-A 271

  Fly   225 PLS--VTVGDFP 234
            |:.  :.:| ||
 Frog   272 PIHKVIRIG-FP 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbcbNP_611425.1 Ubiquitin_2 13..93 CDD:405277
CAP_GLY 160..225 CDD:460154 29/64 (45%)
clip2XP_017947094.2 CAP_GLY 72..136 CDD:460154
CAP_GLY 212..276 CDD:460154 30/68 (44%)
Mplasa_alph_rch 348..871 CDD:275316
EnvC 769..>1005 CDD:443969
Blue background indicates that the domain is not in the aligned region.

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