DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBCB and dctn1b

DIOPT Version :9

Sequence 1:NP_611425.1 Gene:TBCB / 37244 FlyBaseID:FBgn0034451 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_021336434.1 Gene:dctn1b / 100003026 ZFINID:ZDB-GENE-050419-28 Length:1264 Species:Danio rerio


Alignment Length:64 Identity:29/64 - (45%)
Similarity:37/64 - (57%) Gaps:3/64 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LGGRCEVTVPGNPTRRGTIRYNGPLEGKSGHFIGVEYDEPLGKNNGSFGGKAYFTCAPNYGGFV 223
            :|...||...|:   |||:.|.|.....||.::||..|||.|||:|:..||.||.|..|:|.||
Zfish    31 VGSLVEVIGKGH---RGTVAYIGNTLFASGKWVGVILDEPKGKNDGTVQGKRYFLCQENHGIFV 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBCBNP_611425.1 Alp11_N 12..95 CDD:176384
CAP_GLY 161..225 CDD:279625 29/63 (46%)
dctn1bXP_021336434.1 CAP_GLY 31..96 CDD:307465 29/64 (45%)
SMC_N 209..>529 CDD:330553
Dynactin 522..799 CDD:315181
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1550378at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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