DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and TUB4

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_013313.1 Gene:TUB4 / 850909 SGDID:S000004202 Length:473 Species:Saccharomyces cerevisiae


Alignment Length:469 Identity:127/469 - (27%)
Similarity:215/469 - (45%) Gaps:65/469 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATG-------AYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRS 87
            |..::.||.|...|       :...|.|.:     .::.|.|..|:.|||:::|.||..:..|.:
Yeast    22 WSQLAKEHAIGTDGLSQLPDSSTERDDDTK-----PFFRENSRNKFTPRAIMMDSEPSVIADVEN 81

  Fly    88 GPFGQIFRPDNFVFGQSG--AGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGG 150
             .|...|.|.|......|  |||:||.| |..|....|.:|:.:.||.:|.|..:||||.||:.|
Yeast    82 -TFRGFFDPRNTWVASDGASAGNSWANG-YDIGTRNQDDILNKIDKEIDSTDNFEGFQLLHSVAG 144

  Fly   151 GTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 215
            |||||:|:.|:..:.:.||.:|:.||||.|: :.|:.||:.||..|::.:|:|::|.|...||.:
Yeast   145 GTGSGLGSNLLEALCDRYPKKILTTYSVFPA-RSSEVVVQSYNTILALRRLIEDSDATVVFDNAS 208

  Fly   216 LYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 280
            |.:|..:..:.........|.|:|..:|.||..:|||..:.:.:..:...::|.|.|||..|.|.
Yeast   209 LLNISGKVFRNPNIDLQHTNQLISTIISSVTNSIRFPSYMYSSMSSIYSTLIPSPELHFLSPSFT 273

  Fly   281 PLTS---------RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVD 336
            |.||         :|...|      ::...:.|..|.:.:....:..|..|.....|.:..:::.
Yeast   274 PFTSDYIHDDIAHKGHSSY------DVMLDLLDPSNSLVSTAMNNPTYFNVYNTIIGNVEPRQIS 332

  Fly   337 EQMLNIQNKNSSYFVEWIPN----NV--KTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 395
            ..|..:|.:..  |..|..:    |:  ::....:.|...::|...:.|.:.:..:|:.....|.
Yeast   333 RAMTKLQQRIK--FPSWSSSAMHVNIGRRSPYLPLQPNENEVSGMMLSNMSTVVNVFENACNTFD 395

  Fly   396 AMFRRKAFLHWY-TGEGMDEM-----EFTEAESNMNDLVSEYQQYQEATADEDA----------- 443
            .:|.:.|||:.| .|:....|     ||.|:...:..|:.:|     ..|::|:           
Yeast   396 KVFAKGAFLNNYNVGDLFQSMQNVQDEFAESREVVQSLMEDY-----VAAEQDSYLDDVLVDDEN 455

  Fly   444 ---EFEEEQEAEVD 454
               |.||:.:|:.|
Yeast   456 MVGELEEDLDADGD 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 120/437 (27%)
TUB4NP_013313.1 gamma_tubulin 3..437 CDD:276957 119/430 (28%)

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