DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub56D and TUA1

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_176654.1 Gene:TUA1 / 842782 AraportID:AT1G64740 Length:450 Species:Arabidopsis thaliana


Alignment Length:429 Identity:176/429 - (41%)
Similarity:273/429 - (63%) Gaps:11/429 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDLQL--ERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQ 92
            ||:...||||...|....||.:..  :..|.:::|.|.|::|||||.:||||..:|.||:|.:.|
plant    21 WELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQ 85

  Fly    93 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMG 157
            :|.|:..:.|:..|.||:|:||||.|.|:||:.|:.:||.|::|..||||.:.:::|||||||:|
plant    86 LFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLG 150

  Fly   158 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 222
            :||:.::..::..:....:::.|||:||..||||||:.||.|.|:|:||....:||||:||||.|
plant   151 SLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRR 215

  Fly   223 TLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 287
            :|.:..|||.:||.|:|.|:|.:||.|||.|.:|.|:.:...|:||:||:||.:..:||:.|...
plant   216 SLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAK 280

  Fly   288 QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 352
            ..:...:|||:|..:|:..||||.||||||:|:....::||.:..|:|:..:..|:.|.:..||:
plant   281 AYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVD 345

  Fly   353 WIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG 409
            |.|...|..:...||        ..::.:...|.|:||:.|:|.||..:|..|:.::||:|||.|
plant   346 WCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVG 410

  Fly   410 EGMDEMEFTEAESNMNDLVSEYQQY-QEATADEDAEFEE 447
            |||:|.||:||..::..|..:|::. .|...|:|.|.:|
plant   411 EGMEEGEFSEAREDLAALEKDYEEVGGEGAEDDDEEGDE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 172/418 (41%)
TUA1NP_176654.1 PLN00221 1..435 CDD:177802 171/413 (41%)

Return to query results.
Submit another query.