DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and TUB5

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_564101.1 Gene:TUB5 / 838590 AraportID:AT1G20010 Length:449 Species:Arabidopsis thaliana


Alignment Length:427 Identity:362/427 - (84%)
Similarity:403/427 - (94%) Gaps:1/427 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FWEIISDEHGIDATGAYHGD-SDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQ 92
            |||:|.||||||:||.|.|| :|||||||||||||||||:|||||||:|||||||||:|||||||
plant    20 FWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPFGQ 84

  Fly    93 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMG 157
            |||||||||||||||||||||||||||||:|:||||||||||:||||||||:.||||||||||||
plant    85 IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMG 149

  Fly   158 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 222
            ||||||||||||||:|.|:||.|||||||||||||||||||||||||.||...:|||||||||||
plant   150 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 214

  Fly   223 TLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 287
            ||||:||::||||||:|.||||||..||||||||:||||||||::|||||||||.||||||||||
plant   215 TLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 279

  Fly   288 QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 352
            |||.:||||||||||:|:||||.|.|||||||||.:|||||:||.||||||:|||||||||||||
plant   280 QQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVE 344

  Fly   353 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 417
            |||||||::||||||:||||:|||:||||:|||:|:|:|||||||||||||||||||||||||||
plant   345 WIPNNVKSSVCDIPPKGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF 409

  Fly   418 TEAESNMNDLVSEYQQYQEATADEDAEFEEEQEAEVD 454
            |||||||||||:||||||:|||||:.|::.|:|.|.|
plant   410 TEAESNMNDLVAEYQQYQDATADEEGEYDVEEEEEGD 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 350/406 (86%)
PLN00220 29..438 CDD:215107 352/409 (86%)
TUB5NP_564101.1 PLN00220 1..431 CDD:215107 353/410 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 385 1.000 Domainoid score I157
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68504
Inparanoid 1 1.050 798 1.000 Inparanoid score I89
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D962471at2759
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 1 1.000 - - mtm983
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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