DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub56D and TUBAL3

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_079079.1 Gene:TUBAL3 / 79861 HGNCID:23534 Length:446 Species:Homo sapiens


Alignment Length:425 Identity:161/425 - (37%)
Similarity:246/425 - (57%) Gaps:17/425 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDLQLER---------INVYYNEASGGKYVPRAVLVDLEPGTMDSV 85
            ||:...||||...|........|||.         .:.::.|...||:||||:.|||||..:|.:
Human    21 WELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFFCETRAGKHVPRALFVDLEPTVIDGI 85

  Fly    86 RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGG 150
            |:|....:|.|:..:.|:..|.||:|:|.|:.|:|::|.||:..||.||.|..||||.:..|.||
Human    86 RTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSEVIDLVLERTRKLAEQCGGLQGFLIFRSFGG 150

  Fly   151 GTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 215
            |||||..:||:.::..||..:....:||.|:|::|..||||||:.|:.|...|:||.|:.:||||
Human   151 GTGSGFTSLLMERLTGEYSRKTKLEFSVYPAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEA 215

  Fly   216 LYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 280
            :||||.|.|.:..|::..:|.||...:|.:|..|||.|.||.||.:...|:||:||:||.|..||
Human   216 VYDICHRKLGVECPSHASINRLVVQVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFA 280

  Fly   281 PLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNK 345
            |:.|.....:...:|.::|...|::.|.:..||||.|:|:....::||.:..|||:..:...:::
Human   281 PIVSADKAYHEQFSVSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSR 345

  Fly   346 NSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKA 402
            :|..||:|.|...|..:.:.||        ..:..|...:.|:|||.|.:.|:..:|..|:.::|
Human   346 HSVQFVDWCPTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRA 410

  Fly   403 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA 437
            |||||..|||:|.||.||..::..|..:|::..::
Human   411 FLHWYLREGMEEAEFLEAREDLAALERDYEEVAQS 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 161/421 (38%)
PLN00220 29..438 CDD:215107 161/425 (38%)
TUBAL3NP_079079.1 alpha_tubulin 2..442 CDD:276955 161/420 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.