DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tuba8l5

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001161759.1 Gene:tuba8l5 / 792024 ZFINID:ZDB-GENE-100921-8 Length:477 Species:Danio rerio


Alignment Length:431 Identity:167/431 - (38%)
Similarity:259/431 - (60%) Gaps:13/431 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDL--QLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQ 92
            ||:...||||...|....|..:  ..:..|.:::|.:.||:||||:.|||||..:|.||:|.:.|
Zfish    49 WELYCLEHGIQPDGQMPSDRSIGGGDDSFNTFFSETASGKHVPRAIFVDLEPTVIDEVRTGTYRQ 113

  Fly    93 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMG 157
            :|.|:..:.|:..|.||:|:||||.|.|::|||||.:||.::.|..||||.:.||.|||||||..
Zfish   114 LFHPEQLITGKEDAANNYARGHYTIGKEIIDSVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFT 178

  Fly   158 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 222
            :||:.::..:|..:....:::.|:|:||..||||||:.|:.|..:|::|..:.:||||:||||.:
Zfish   179 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRK 243

  Fly   223 TLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 287
            .|.:..|||.:||.|:...:|.:|..|||.|.||.||.:...|:||:||:||.:..:||:.|...
Zfish   244 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK 308

  Fly   288 QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 352
            ..:..|:|.::|...|:..|.|..||||||:|:....::||.:..|:|:..:..|:.|.:..||:
Zfish   309 AYHEQLSVADITNACFEPSNQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRTIQFVD 373

  Fly   353 WIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG 409
            |.|...|..:...||        ..::.:...:.|:|||.|.:.|:..:|..|:.::||:|||.|
Zfish   374 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 438

  Fly   410 EGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQE 450
            |||:|.||:||.   .||.:..:.|:|...|...:.|:..|
Zfish   439 EGMEEGEFSEAR---EDLAALEKDYEEVGTDSIGDDEDGVE 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 162/414 (39%)
PLN00220 29..438 CDD:215107 164/417 (39%)
tuba8l5NP_001161759.1 PTZ00335 30..474 CDD:185562 166/427 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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