DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and Tubb6

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_080749.2 Gene:Tubb6 / 67951 MGIID:1915201 Length:447 Species:Mus musculus


Alignment Length:430 Identity:387/430 - (90%)
Similarity:407/430 - (94%) Gaps:1/430 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TCFWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFG 91
            |.|||:||||||||..|.|.|||.||||||:|||||:|..||||||.||||||||||||||||||
Mouse    18 TKFWEVISDEHGIDQAGGYVGDSALQLERISVYYNESSSKKYVPRAALVDLEPGTMDSVRSGPFG 82

  Fly    92 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGM 156
            |:||||||:|||:||||||||||||||||||||||||||||.|.|||||||||||||||||||||
Mouse    83 QLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGM 147

  Fly   157 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 221
            |||||||||||||||||||:||:||||||||||||||||||||||||||||||||||||||||||
Mouse   148 GTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 212

  Fly   222 RTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 286
            ||||||||||||||||||.|||||||.|||||||||||||||||||||||||||||||||||:||
Mouse   213 RTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARG 277

  Fly   287 SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFV 351
            |||||||||||||||||||||||||||||||||||||.:|||.|||||||||||.||||||||||
Mouse   278 SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFV 342

  Fly   352 EWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEME 416
            ||||||||.||||||||||||::||||||||||||||||||||:|||||||||||:|||||||||
Mouse   343 EWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEME 407

  Fly   417 FTEAESNMNDLVSEYQQYQEATADEDAE-FEEEQEAEVDE 455
            |||||||||||||||||||:||.::..| ||:|.|.|::|
Mouse   408 FTEAESNMNDLVSEYQQYQDATVNDGEEAFEDEDEEEINE 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 376/407 (92%)
PLN00220 29..438 CDD:215107 377/408 (92%)
Tubb6NP_080749.2 PLN00220 1..431 CDD:215107 380/412 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.830

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