Protein Alignment betaTub56D and Tubb1

DIOPT Version :9

• Sequence 1: NP_725896.1
• Gene: betaTub56D / 37238
• FlyBaseID: FBgn0284243
• Length: 456
• Species: Drosophila melanogaster
• Sequence 2: XP_003749686.1
• Gene: Tubb1 / 679312
• RGDID: 1589557
• Length: 452
• Species: Rattus norvegicus
• Alignment Length: 432
• Identity: 335/432 - (77%)
• Similarity: 387/432 - (89%)
• Gaps: 4/432 - (0%)

  Fly    29 FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQI 93
            |||:|.:|||||..|:|.|.|.||||||:||||||.|.||||||||||||||||||:||...|.:
  Rat    20 FWEVIGEEHGIDCAGSYCGTSALQLERISVYYNEAYGKKYVPRAVLVDLEPGTMDSIRSSRLGIL 84

  Fly    94 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGT 158
            |:||:||.|.||||||||||||||||||:::|:||||:|:||||||||||:.|||||||||||||
  Rat    85 FQPDSFVHGNSGAGNNWAKGHYTEGAELIETVMDVVRRESESCDCLQGFQIVHSLGGGTGSGMGT 149

  Fly   159 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 223
            ||::||||||||||:|::||:|||||||||||||||.||:|||:||||..:||||||||||||||
  Rat   150 LLMNKIREEYPDRILNSFSVMPSPKVSDTVVEPYNAVLSIHQLIENTDACFCIDNEALYDICFRT 214

  Fly   224 LKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 288
            |:|||||||||||||||||||:||.|||||||||||||||||||||||||||||||||||::|||
  Rat   215 LRLTTPTYGDLNHLVSLTMSGITTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQ 279

  Fly   289 QYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 353
            |||||:|.|||||||||:|:|||||||.|||||||.||||:||.||||:|:|:||.:||:.||||
  Rat   280 QYRALSVAELTQQMFDARNIMAACDPRRGRYLTVACIFRGKMSTKEVDQQLLSIQTRNSNCFVEW 344

  Fly   354 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 418
            ||||||.||||||||||.|:|||:||:|||||||.|:||.|:|||||:||:||||.||||..||.
  Rat   345 IPNNVKVAVCDIPPRGLNMAATFLGNNTAIQELFTRVSEHFSAMFRRRAFVHWYTSEGMDISEFG 409

  Fly   419 EAESNMNDLVSEYQQYQEATAD-EDAEFEEEQEAEV---DEN 456
            |||:::.||||||||:|:..|. ||.|...|:|||:   |:|
  Rat   410 EAEADILDLVSEYQQFQDVRAGLEDIEEGGEEEAEMGAEDKN 451

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
betaTub56D	NP_725896.1	beta_tubulin	26..435	CDD:276956	324/405 (80%)
		PLN00220	29..438	CDD:215107	325/408 (80%)
Tubb1	XP_003749686.1	PTZ00010	1..428	CDD:240228	325/407 (80%)
		beta_tubulin	2..426	CDD:276956	324/405 (80%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5023
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D259639at33208
OrthoFinder	1	1.000	-	-		FOG0000096
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100137
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X99
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	6.720