DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub56D and tubb1

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001313351.1 Gene:tubb1 / 558552 ZFINID:ZDB-GENE-110408-5 Length:466 Species:Danio rerio


Alignment Length:424 Identity:360/424 - (84%)
Similarity:390/424 - (91%) Gaps:0/424 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQI 93
            |||:|||||||:..|||.||.||||||:|||:|||.||||||||:|||||||||||||....||:
Zfish    20 FWEVISDEHGINRVGAYEGDMDLQLERVNVYFNEAHGGKYVPRALLVDLEPGTMDSVRGSQIGQL 84

  Fly    94 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGT 158
            ||||||:.|.|||||||||||||||||||:.|:|.||.|||||||:||||..|||||||||||||
Zfish    85 FRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVDRVRNEAESCDCMQGFQFVHSLGGGTGSGMGT 149

  Fly   159 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 223
            |:|:||||||||||||::||:||||||||||||||||||:|||:|||||||||||||||||||||
Zfish   150 LIINKIREEYPDRIMNSFSVMPSPKVSDTVVEPYNATLSIHQLIENTDETYCIDNEALYDICFRT 214

  Fly   224 LKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 288
            ||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||:||||
Zfish   215 LKLTTPTYGDLNHLVSLTMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQ 279

  Fly   289 QYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 353
            ||||||||||||||||.:|||.|||||.|||||||.|||||||.||||||||.||.|||:|||:|
Zfish   280 QYRALTVPELTQQMFDPRNMMTACDPRRGRYLTVAGIFRGRMSTKEVDEQMLAIQQKNSNYFVDW 344

  Fly   354 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 418
            ||:|||.||||||||||||::|||||:|||||:||||.|||..||||||||||||||||||:||:
Zfish   345 IPHNVKVAVCDIPPRGLKMASTFIGNNTAIQEVFKRIGEQFALMFRRKAFLHWYTGEGMDELEFS 409

  Fly   419 EAESNMNDLVSEYQQYQEATADEDAEFEEEQEAE 452
            |||||:|||||||||||:||||.|.|.||..|.|
Zfish   410 EAESNLNDLVSEYQQYQDATADMDYEEEEVMEEE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 348/405 (86%)
PLN00220 29..438 CDD:215107 350/408 (86%)
tubb1NP_001313351.1 PTZ00010 1..433 CDD:240228 354/412 (86%)
beta_tubulin 2..426 CDD:276956 348/405 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.730

Return to query results.
Submit another query.