DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tubb2

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001019593.1 Gene:tubb2 / 554127 ZFINID:ZDB-GENE-050522-384 Length:449 Species:Danio rerio


Alignment Length:427 Identity:398/427 - (93%)
Similarity:415/427 - (97%) Gaps:1/427 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQI 93
            |||:||||||||.||:|.|||:|||||||||||||||.|:||||:||||||||||||||||||||
Zfish    20 FWEVISDEHGIDPTGSYQGDSELQLERINVYYNEASGNKFVPRAILVDLEPGTMDSVRSGPFGQI 84

  Fly    94 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGT 158
            |||||||||||||||||||||||||||||||||||||||:|:|||||||||||||||||||||||
Zfish    85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESENCDCLQGFQLTHSLGGGTGSGMGT 149

  Fly   159 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 223
            |||||||||||||||||:||:|||||||||||||||||||||||||||||:.|||||||||||||
Zfish   150 LLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETFSIDNEALYDICFRT 214

  Fly   224 LKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 288
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   215 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 279

  Fly   289 QYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 353
            |||||:||||||||||||||||||||||||||||||||||||||||||||||::|||||||||||
Zfish   280 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSVQNKNSSYFVEW 344

  Fly   354 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 418
            ||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||
Zfish   345 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFRRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 409

  Fly   419 EAESNMNDLVSEYQQYQEATADEDAEFEEEQ-EAEVD 454
            ||||||||||.||||||:|||||..|:||:. |.|.|
Zfish   410 EAESNMNDLVFEYQQYQDATADEMGEYEEDDLEDEED 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 385/405 (95%)
PLN00220 29..438 CDD:215107 387/408 (95%)
tubb2NP_001019593.1 PLN00220 1..434 CDD:215107 392/413 (95%)
beta_tubulin 2..426 CDD:276956 385/405 (95%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.730

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