DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tubb6

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001017762.2 Gene:tubb6 / 550458 ZFINID:ZDB-GENE-070424-195 Length:447 Species:Danio rerio


Alignment Length:431 Identity:384/431 - (89%)
Similarity:407/431 - (94%) Gaps:3/431 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TCFWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFG 91
            |.|||:||||||||..|:|.|||.|||:||||||||||..||||||:|||||||||||||||.||
Zfish    18 TKFWEVISDEHGIDPAGSYVGDSSLQLDRINVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFG 82

  Fly    92 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGM 156
            |:||||||:|||:|||||||||||||||||||||||:||||.|.|||||||||||||||||||||
Zfish    83 QLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDIVRKECEYCDCLQGFQLTHSLGGGTGSGM 147

  Fly   157 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 221
            |||||||||||||||||||:||:||||||||||||||||||||||||||||||||||||||||||
Zfish   148 GTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 212

  Fly   222 RTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 286
            ||||||||||||||||||.|||||||.|||||||||||||||||||||||||||||||||||:||
Zfish   213 RTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARG 277

  Fly   287 SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFV 351
            |||||||||||||||||||:|||||||||.|||||||.:|||.|||||||||||.||||||||||
Zfish   278 SQQYRALTVPELTQQMFDARNMMAACDPRLGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFV 342

  Fly   352 EWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEME 416
            ||||||||.||||||||||||::||||||||||||||||||||:|||:|||||||:|||||||||
Zfish   343 EWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFKRKAFLHWFTGEGMDEME 407

  Fly   417 FTEAESNMNDLVSEYQQYQEATAD--EDAEFEEEQEAEVDE 455
            ||||||||||||||||||||||..  |:| |:::.|.||:|
Zfish   408 FTEAESNMNDLVSEYQQYQEATCSIGEEA-FDDDDEEEVNE 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 372/407 (91%)
PLN00220 29..438 CDD:215107 374/408 (92%)
tubb6NP_001017762.2 PLN00220 1..429 CDD:215107 375/410 (91%)
beta_tubulin 2..426 CDD:276956 372/407 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.930

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