DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and Tubb1

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001074440.1 Gene:Tubb1 / 545486 MGIID:107814 Length:451 Species:Mus musculus


Alignment Length:427 Identity:335/427 - (78%)
Similarity:388/427 - (90%) Gaps:2/427 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQI 93
            |||:|.:|||||..|:|.|.|.||||||:||||||.|.||||||||||||||||||:||...|.:
Mouse    20 FWEVIGEEHGIDCAGSYCGTSALQLERISVYYNEAYGKKYVPRAVLVDLEPGTMDSIRSSRLGVL 84

  Fly    94 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGT 158
            |:||:||.|.||||||||||||||||||:::|:||||:|:||||||||||:.|||||||||||||
Mouse    85 FQPDSFVHGNSGAGNNWAKGHYTEGAELIENVMDVVRRESESCDCLQGFQIVHSLGGGTGSGMGT 149

  Fly   159 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 223
            ||::||||||||||:|::||:|||||||||||||||.||:|||:||||..:||||||||||||||
Mouse   150 LLMNKIREEYPDRILNSFSVMPSPKVSDTVVEPYNAVLSIHQLIENTDACFCIDNEALYDICFRT 214

  Fly   224 LKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 288
            |:|||||||||||||||||||:||.|||||||||||||||||||||||||||||||||||::|||
Mouse   215 LRLTTPTYGDLNHLVSLTMSGITTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQ 279

  Fly   289 QYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 353
            |||||:|.|||||||||:|:|||||||.|||||||.||||:||.||||:|:|:||.:||:.||||
Mouse   280 QYRALSVAELTQQMFDARNIMAACDPRRGRYLTVACIFRGKMSTKEVDQQLLSIQTRNSNCFVEW 344

  Fly   354 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 418
            ||||||.||||||||||.|:|||:||:|||||||.|:||.|:|||||:||:||||.||||..||.
Mouse   345 IPNNVKVAVCDIPPRGLNMAATFLGNNTAIQELFTRVSEHFSAMFRRRAFVHWYTSEGMDISEFG 409

  Fly   419 EAESNMNDLVSEYQQYQEATAD-EDAEFEEEQEAEVD 454
            ||||:::||||||||:|:..|. ||:| |:.:||||:
Mouse   410 EAESDIHDLVSEYQQFQDVRAGLEDSE-EDVEEAEVE 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 326/408 (80%)
Tubb1NP_001074440.1 PTZ00010 1..428 CDD:240228 326/407 (80%)
MREI motif. /evidence=ECO:0000250|UniProtKB:P07437 1..4
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 430..451 9/17 (53%)
Blue background indicates that the domain is not in the aligned region.

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