DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub56D and Tuba8

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_059075.1 Gene:Tuba8 / 53857 MGIID:1858225 Length:449 Species:Mus musculus


Alignment Length:437 Identity:175/437 - (40%)
Similarity:262/437 - (59%) Gaps:24/437 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDLQLERIN------VYYNEASGGKYVPRAVLVDLEPGTMDSVRSG 88
            ||:...||||.|.|.:    ..|..:||      .:::|...||:|||||:|||||..:|.||:|
Mouse    21 WELFCLEHGIQADGTF----GTQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAG 81

  Fly    89 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTG 153
            .:.|:|.|:..:.|:..|.||:|:||||.|.|.:|.|||.:||..::|..||||.:.||.|||||
Mouse    82 TYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTG 146

  Fly   154 SGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYD 218
            ||..:||:.::..:|..:....:::.|:|:||..||||||:.|:.|..:|::|..:.:||||:||
Mouse   147 SGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211

  Fly   219 ICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 283
            ||.|.|.:..|||.:||.|:|..:|.:|..|||.|.||.||.:...|:||:||:||.:..:||:.
Mouse   212 ICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPII 276

  Fly   284 SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSS 348
            |.....:..|:|.|:|...|:..:.|..||||||:|:....::||.:..|:|:..:..|:.|.:.
Mouse   277 SAEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTI 341

  Fly   349 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 405
            .||:|.|...|..:...||        ..::.:...:.|:|||.|.:.|:..:|..|:.::||:|
Mouse   342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVH 406

  Fly   406 WYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQEAE 452
            ||.||||:|.||:||.   .||.:..:.|:|...|   .||||.|.|
Mouse   407 WYVGEGMEEGEFSEAR---EDLAALEKDYEEVGTD---SFEEENEGE 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 166/418 (40%)
PLN00220 29..438 CDD:215107 168/421 (40%)
Tuba8NP_059075.1 PTZ00335 1..439 CDD:185562 169/427 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.