DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and TUBE1

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_057346.1 Gene:TUBE1 / 51175 HGNCID:20775 Length:475 Species:Homo sapiens


Alignment Length:449 Identity:146/449 - (32%)
Similarity:231/449 - (51%) Gaps:54/449 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 CFWEIISDEH-GIDATGAYHGDSDLQLERINVYYNEA-----------SGGKYV---PRAVLVDL 77
            |||::...|| .::..|.|.       |.|:.::...           |.||..   .||||:|:
Human    19 CFWDLALREHAAVNQKGIYD-------EAISSFFRNVDTRVVGDGGSISKGKICSLKARAVLIDM 76

  Fly    78 EPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 142
            |.|.::.:..||...:|.....:...||:|||||.||...|:...|.:|:..||.||.|||||.|
Human    77 EEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLYQDQILEKFRKSAEHCDCLQCF 141

  Fly   143 QLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDE 207
            .:.||:|||||||:||.|:..:.:|:|:......|:.||.: .|.:..|||:.|::.:|.|:.|.
Human   142 FIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSGE-DDVITSPYNSILAMKELNEHADC 205

  Fly   208 TYCIDNEALYDICFR------------TLK---LTTPTYGDL-----------NHLVSLTMSGVT 246
            ...|||::|:||..:            |:|   |.|.:.|.|           |::|:..:..:|
Human   206 VLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLT 270

  Fly   247 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 311
            :..||.|.||.||.::::|:||||:||:.:....||.:..........:.::....|...:.:..
Human   271 SSARFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLR 335

  Fly   312 CDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQN-KNSSYFVEWIPNNVKTAVCDIPPRGLKMSAT 375
            .||:|..||..|.:.||.:   ::.:...||:. |.|..||.|.....||::|.:||.|...|..
Human   336 ADPKHSLYLACALMVRGNV---QISDLRRNIERLKPSLQFVSWNQEGWKTSLCSVPPVGHSHSLL 397

  Fly   376 FIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQ 433
            .:.|:|.::..|..:.|:|..::::||.||.|.. |||:|..||||.|:::.|:.||.|
Human   398 ALANNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQ 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 146/449 (33%)
PLN00220 29..438 CDD:215107 145/448 (32%)
TUBE1NP_057346.1 epsilon_tubulin 2..457 CDD:276959 146/449 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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