DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and yipf2

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001008078.1 Gene:yipf2 / 493440 XenbaseID:XB-GENE-997076 Length:301 Species:Xenopus tropicalis


Alignment Length:182 Identity:32/182 - (17%)
Similarity:57/182 - (31%) Gaps:75/182 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 ELTQQMFDAKNMMAACD-------------PRHGRYLTVAAIFRGRMSMKEVDE----QMLNIQN 344
            :|..|.||....:.|.|             |:|      |.:..|..|.:|..|    ::|..|.
 Frog     6 DLKFQEFDEAADLLAADPGATTKSLTEESRPQH------ATLHVGGDSEEEEGESDQTELLASQK 64

  Fly   345 KNSS-----YFVEW-------IPNNVKTAVCDIPPRG---------------------LKMSATF 376
            |.||     |:.::       :.:.::.::..||.:.                     |.::.|.
 Frog    65 KTSSFWTFQYYQDFFDIDTYQVLDRIRGSILPIPGKNFVRNHLRNNPDLYGPFWICTTLVITVTI 129

  Fly   377 IGNSTAIQELFKRISEQFTAMFRRKA-------------------FLHWYTG 409
            :||......|..:...|::..|.:.:                   ||.|..|
 Frog   130 MGNLGTYMLLHDQEGYQYSPEFHKLSVAGVAIYSYAWAVPLGLWGFLQWRKG 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 32/182 (18%)
yipf2NP_001008078.1 Yip1 94..267 CDD:461468 13/88 (15%)

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