DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tubd1

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001002093.1 Gene:tubd1 / 415183 ZFINID:ZDB-GENE-040625-73 Length:446 Species:Danio rerio


Alignment Length:434 Identity:111/434 - (25%)
Similarity:195/434 - (44%) Gaps:42/434 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDS--VRSGPFGQ 92
            :.:|||:........|...||   ||   ::.:.|.|:.|.|:||||:||..:..  .::...|:
Zfish    20 FSVISDDSNGPNRKKYKQCSD---ER---FFYQNSAGELVARSVLVDMEPKVISQALAKASKSGR 78

  Fly    93 IFRPDNFVFGQ-SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGM 156
            ....|...|.| .|:|||||.|....|....:.|.|:||.|.|.||.|.|.....|:.||||||:
Zfish    79 WRYGDKAHFSQKQGSGNNWANGFCVHGPRHKEDVEDLVRMEVERCDRLAGIFTMMSVAGGTGSGV 143

  Fly   157 GTLLISKIREEYPDR-IMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 220
            ||.:..::|:.||.. |:|  .|.......:.:|:.||:.|::..|.:.:|.....:|:.::.||
Zfish   144 GTYITQRLRDLYPQSFILN--QVTWPYGAGEVIVQNYNSVLTLSHLYQLSDAILVHENDTVHKIC 206

  Fly   221 FRTLKLTTPTYGDLNHLVSLTMSGV---TTCLRFPGQLNAD-LRKLAVNMVPFPRLHFFMPGFAP 281
            .:.:.:...:..|:|.::|..::.|   ......|...:.: :.:|..::|..|..........|
Zfish   207 SQLMNIKHISISDINKVISHQLASVLQPVYTAHSPDYYSRNPIGELLTSLVCHPEYKLLSLCNIP 271

  Fly   282 LTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTV---AAIFRGRMSMKEVDEQMLN-- 341
            ..|..|..|.....|.|.:.:  .:.::|:.....|...||   :.:..|..|:..:..:..|  
Zfish   272 QMSSTSLAYSVFNWPGLLKHL--RQMLIASARMEEGIDWTVNVPSVVLSGAESVTNIRHKSFNSS 334

  Fly   342 ------IQNKNSS-----------YFVEWI--PNNVKTAVCDIPPRGLKMSATFIGNSTAIQELF 387
                  ::.|:.|           .:|.|:  .|:..|....||..|.:.|||.:.||.::.:..
Zfish   335 LANLLILRGKDVSTAVTDGFKDPLLYVPWLKAENSFSTWSSPIPFNGYEKSATLVSNSQSLLKPL 399

  Fly   388 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 431
            ..|..:...||..:|::|.||..|:.|.:|.::.:.:..::|.|
Zfish   400 DNIVRKAWNMFASRAYIHQYTKFGISEEDFLDSFTALEQIISSY 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 111/434 (26%)
tubd1NP_001002093.1 delta_zeta_tubulin-like 2..445 CDD:276958 111/434 (26%)

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