DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and alphaTub85E

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster


Alignment Length:433 Identity:175/433 - (40%)
Similarity:258/433 - (59%) Gaps:17/433 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDLQL----ERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPF 90
            ||:...||||...|  |..||..:    :..:.:::|...||:|||||.|||||..:|.||:|.:
  Fly    21 WELYCLEHGIQPDG--HMPSDKTVGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 83

  Fly    91 GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSG 155
            .|:|.|:..:.|:..|.||:|:||||.|.|:||.|||.:||.|:.|..||||.:.||.|||||||
  Fly    84 RQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHSFGGGTGSG 148

  Fly   156 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 220
            ..:||:.::..:|..:....:|:.|:|:||..||||||:.|:.|..:|::|..:.:||||:||||
  Fly   149 FTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 213

  Fly   221 FRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR 285
            .|.|.:..|||.:||.|:...:|.:|..|||.|.||.||.:...|:||:||:||.:..:||:.|.
  Fly   214 RRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISV 278

  Fly   286 GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYF 350
            ....:..|||.|:|...|:..|.|..||||.|:|:....::||.:..|:|:..:..|:.|.|..|
  Fly   279 EKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQF 343

  Fly   351 VEWIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 407
            |:|.|...|..:...||        ..::.:...:.|:|||.|.:.|:..:|..|:.::||:|||
  Fly   344 VDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 408

  Fly   408 TGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQE 450
            .||||:|.||.||.   .||.:..:.|:|...|...|..|::|
  Fly   409 VGEGMEEGEFAEAR---EDLAALEKDYEEVGIDSTTELGEDEE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 169/416 (41%)
PLN00220 29..438 CDD:215107 171/419 (41%)
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 174/431 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443488
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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