DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and alphaTub84D

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster


Alignment Length:429 Identity:170/429 - (39%)
Similarity:257/429 - (59%) Gaps:10/429 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDL--QLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQ 92
            ||:...||||...|....|..:  ..:..|.:::|...||:|||||.|||||..:|.||:|.:.|
  Fly    21 WELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 85

  Fly    93 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMG 157
            :|.|:..:.|:..|.||:|:||||.|.|:||.|||.:||.|:.|..||||.:.||.|||||||..
  Fly    86 LFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFT 150

  Fly   158 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 222
            :||:.::..:|..:....::|.|:|:||..||||||:.|:.|..:|::|..:.:||||:||||.|
  Fly   151 SLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

  Fly   223 TLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 287
            .|.:..|||.:||.|:...:|.:|..|||.|.||.||.:...|:||:||:||.:..:||:.|...
  Fly   216 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 280

  Fly   288 QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 352
            ..:..|:|.|:|...|:..|.|...|||||:|:....::||.:..|:|:..:..|:.|.:..||:
  Fly   281 AYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 345

  Fly   353 WIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG 409
            |.|...|..:...||        ..::.:...:.|:|||.|.:.|:..:|..|:.::||:|||.|
  Fly   346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 410

  Fly   410 EGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEE 448
            |||:|.||:||..::..|..:|::....:.|.:.|..||
  Fly   411 EGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 166/414 (40%)
PLN00220 29..438 CDD:215107 166/417 (40%)
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 166/417 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443487
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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