DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tuba1cl.3

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_989129.1 Gene:tuba1cl.3 / 394734 XenbaseID:XB-GENE-5834444 Length:451 Species:Xenopus tropicalis


Alignment Length:431 Identity:171/431 - (39%)
Similarity:259/431 - (60%) Gaps:12/431 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDL--QLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQ 92
            ||:...||||...|....|..:  ..:..|.:::|...||:|||||.|||||..:|.||:|.:.|
 Frog    21 WELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQ 85

  Fly    93 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMG 157
            :|.|:..:.|:..|.||:|:||||.|.|::|.|||.:||.|:.|..||||.:.||.|||||||..
 Frog    86 LFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFT 150

  Fly   158 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 222
            :||:.::..:|..:....:|:.|:|::|..||||||:.|:.|..:|::|..:.:||||:||||.|
 Frog   151 SLLMERLSVDYGKKSKLEFSIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

  Fly   223 TLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 287
            .|.:..|||.:||.|:...:|.:|..|||.|.||.||.:...|:||:||:||.:..:||:.|...
 Frog   216 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK 280

  Fly   288 QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 352
            ..:..|:|.|:|...|:..|.|..||||||:|:....::||.:..|:|:..:..::.|.:..||:
 Frog   281 AYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATVKTKRTIQFVD 345

  Fly   353 WIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG 409
            |.|...|..:...||        ..::.:...:.|:|||.|.:.|:..:|..|:.::||:|||.|
 Frog   346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 410

  Fly   410 EGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQE 450
            |||:|.||:||..:|..|..:|::.  .|...:.|.|||.|
 Frog   411 EGMEEGEFSEAREDMAALEKDYEEV--GTDSVEGEGEEEGE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 165/417 (40%)
tuba1cl.3NP_989129.1 PTZ00335 1..440 CDD:185562 166/420 (40%)

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