DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tube1

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_957279.3 Gene:tube1 / 393960 ZFINID:ZDB-GENE-040426-1174 Length:470 Species:Danio rerio


Alignment Length:440 Identity:146/440 - (33%)
Similarity:230/440 - (52%) Gaps:44/440 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FWEIISDEHG-IDATGAYHGDSDLQLERINV-----YYNEASGGKYV---PRAVLVDLEPGTMDS 84
            ||::...||. ::..|.|  |..|.....||     |..||:|||..   .||||||:|.|.:..
Zfish    20 FWDLALREHAHVNQMGVY--DDALSSFFRNVDQRRGYGAEATGGKITALKARAVLVDMEEGVLGG 82

  Fly    85 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLG 149
            :..||...:|.....:...||:|||||.||:|.|....:.::|.|||.||.|||||.|.|.||:|
Zfish    83 ILQGPLRSLFSSAQLISDVSGSGNNWAVGHHTYGLAYREQIVDQVRKAAEHCDCLQCFFLIHSMG 147

  Fly   150 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNE 214
            ||||||:||.::..:.||:|:......||.|:.: .|.:..|||:.|::.:|.|:.|....:||:
Zfish   148 GGTGSGLGTFVLKLLEEEFPEVYRIVTSVYPTAE-DDVITSPYNSVLAMKELTEHADCVLPVDNQ 211

  Fly   215 ALYDICFR--------------------------TLKLTTPTYGDLNHLVSLTMSGVTTCLRFPG 253
            :|.||..:                          .:|:..| :..:|::|:..:..:|:..||.|
Zfish   212 SLVDIVGKIKHMSNTGKPGCAIKKDSTIISGQGGVVKVEKP-FDAMNNIVANLLLNITSSARFEG 275

  Fly   254 QLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGR 318
            .||.||.::|:|:|||||||:.:....||.:..........:.::....|..::.:...||:|..
Zfish   276 SLNMDLNEIAMNLVPFPRLHYLVSSLTPLYTLADVSVPPRRLDQMFSDAFSKEHQLIRADPKHNL 340

  Fly   319 YLTVAAIFRGRMSMKEVDEQMLNIQNKNSSY-FVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTA 382
            ||..|.:.||.:.:.::..   ||:....:. ||.|.....||::|.:||.|...|...:.|:|.
Zfish   341 YLACALMLRGNVQLSDLRR---NIERLRPTLPFVPWNQEGWKTSLCSVPPVGHSHSLLALANNTC 402

  Fly   383 IQELFKRISEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEY 431
            ::..|..:.|:|..::||||.||.|.. :||::..||||.|:::.|:.:|
Zfish   403 VKSTFSELRERFMKLYRRKAHLHHYLAVDGMEQSGFTEALSSISTLIEDY 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 146/440 (33%)
tube1NP_957279.3 None

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