DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tubg1

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_957202.1 Gene:tubg1 / 393882 ZFINID:ZDB-GENE-040426-836 Length:451 Species:Danio rerio


Alignment Length:420 Identity:140/420 - (33%)
Similarity:240/420 - (57%) Gaps:22/420 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQI 93
            ||:.:..||||...|.....:....:|.:|::.:|....|:|||||:||||..:.::.:.|:..:
Zfish    21 FWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHTILNSPYANL 85

  Fly    94 FRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGM 156
            :.|:|....:  .|||||||.| :::|.::.:.:.|::.:||:..|.|:||.|.||:.||||||:
Zfish    86 YNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGL 149

  Fly   157 GTLLISKIREEYPDRIMNTYSVVPS-PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 220
            |:.|:.::.:.||.:::.||||.|: .::||.||:|||:.|::.:|.:|.|....:||.||..|.
Zfish   150 GSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIA 214

  Fly   221 FRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR 285
            ...|.:..|::..:|.|||..||..||.||:||.:|.||..|..:::|.|||||.|.|:.|||:.
Zfish   215 TDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTD 279

  Fly   286 GS-QQYRALTVPELTQQMFDAKNMMAACDPRHGR-------YLTVAAIFRGRMSMKEVDEQMLNI 342
            .| ...|..||.::.:::...||:|.:.    ||       |:.:..|.:|.:...:|.:.:..|
Zfish   280 QSVASVRKTTVLDVMRRLLQPKNVMVST----GRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRI 340

  Fly   343 QNKNSSYFVEWIPNNVKTAV---CDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFL 404
            :.:..:.|:.|.|.:::.|:   ....|...::|...:.|.|:|..||:|...|:..:.:|:|||
Zfish   341 RERKLANFIPWGPASIQVALSRRSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFL 405

  Fly   405 HWYTGEGMDEMEFTEAESN---MNDLVSEY 431
            ..:..|.:.:..|.|.:::   :..||.||
Zfish   406 EQFRKEDIFKDNFDELDNSREVVQQLVDEY 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 140/420 (33%)
tubg1NP_957202.1 gamma_tubulin 3..435 CDD:276957 138/418 (33%)

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