DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tubg1

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_957202.1 Gene:tubg1 / 393882 ZFINID:ZDB-GENE-040426-836 Length:451 Species:Danio rerio


Alignment Length:420 Identity:140/420 - (33%)
Similarity:240/420 - (57%) Gaps:22/420 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQI 93
            ||:.:..||||...|.....:....:|.:|::.:|....|:|||||:||||..:.::.:.|:..:
Zfish    21 FWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHTILNSPYANL 85

  Fly    94 FRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGM 156
            :.|:|....:  .|||||||.| :::|.::.:.:.|::.:||:..|.|:||.|.||:.||||||:
Zfish    86 YNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGL 149

  Fly   157 GTLLISKIREEYPDRIMNTYSVVPS-PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 220
            |:.|:.::.:.||.:::.||||.|: .::||.||:|||:.|::.:|.:|.|....:||.||..|.
Zfish   150 GSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIA 214

  Fly   221 FRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR 285
            ...|.:..|::..:|.|||..||..||.||:||.:|.||..|..:::|.|||||.|.|:.|||:.
Zfish   215 TDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTD 279

  Fly   286 GS-QQYRALTVPELTQQMFDAKNMMAACDPRHGR-------YLTVAAIFRGRMSMKEVDEQMLNI 342
            .| ...|..||.::.:::...||:|.:.    ||       |:.:..|.:|.:...:|.:.:..|
Zfish   280 QSVASVRKTTVLDVMRRLLQPKNVMVST----GRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRI 340

  Fly   343 QNKNSSYFVEWIPNNVKTAV---CDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFL 404
            :.:..:.|:.|.|.:::.|:   ....|...::|...:.|.|:|..||:|...|:..:.:|:|||
Zfish   341 RERKLANFIPWGPASIQVALSRRSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFL 405

  Fly   405 HWYTGEGMDEMEFTEAESN---MNDLVSEY 431
            ..:..|.:.:..|.|.:::   :..||.||
Zfish   406 EQFRKEDIFKDNFDELDNSREVVQQLVDEY 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 140/420 (33%)
PLN00220 29..438 CDD:215107 140/420 (33%)
tubg1NP_957202.1 gamma_tubulin 3..435 CDD:276957 138/418 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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